| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2878 |
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| Symbol | |
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| ID | 7860409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3213014 |
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| End bp | 3214858 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643866975 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_002882885 |
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| Protein GI | 229821359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00832134 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTTGC CCACCAGCGA CGTCCCCCGT CCCGAGTACC CCCGCCCCCA GATGGTCCGG
CCCGACTGGC TCAACCTCAA CGGCACCTGG CAGTTCGAGA TCGACGGCGG CGACTCGGGT
CTCGAGCGCG GCCTGGTCGA GAGCGACCTG GCCGGCGAGA TCACCGTGCC GTTCGCTCCG
GAGTCGGAGC TGTCCGGCGT CGGGAACGTC GACTTCATGG AGGCGGTCTG GTACCGCCGC
ACCGTCACGA TCCCCGCCGA CTGGGCCGGG AAGAAGGCGC TGCTGCACTT CGGCGCCGTC
GACCACGACA CCACGGTGTG GGTGAACGGC ACCGAGGTGG TGCGCCACCG CGGCGGGTTC
TCCCCGTTCA CCGCCGACCT CGACGGCGTC GCTGCGCCGG GCGAGGAGGC GACGATCGTC
GTCCGCGCCC GCGACCCCCG GCACACGCCG CAGGCCCGCG GCAAGCAGGC CACGAAGTTC
ATCAACTCGG AGTGCAACTA CACGCGCACC ACCGGGATCT GGCAGACCGT GTGGCTCGAG
CCGGTGCCGC ACGTGCACCT GCGCCGTCCG CGCATCACGC CCGACGTCGC GACCAGCTCG
TTCACGGTCG TCGCGCCGCT CTCCAACAAC CGGCCGGGCT TCTCCGTGCG GGTCACGGTG
GGCGACGCCG ACGGCGCGAT CGCCACCGCG ACCGCCCGTG CCGACGTCGA CCTGGCGCCC
TCGCTGCGGC TGGAGGTGCC CGCGGACCGC GTGCACCTGT GGTCCGCTGG TGACGGGCAC
CTGTACGACG TCACGGTCGA GCTGCTGGAC GCCGACGGCG CCGTGGTCGA CGCCGTCGAC
TCCTACGCCG GCCTGCGGTC GGTCTCGATC GACGGCAAGC GCATCCTCAT CAACGGCAAG
CCCGTCTTCC AGCGCCTCGT GCTCGACCAG GGCTACTACC CCGACGGCAT CATGACGGCG
CCGACGGACG ACGCGCTGGT CCGCGACATC GAGCTCAGCC TCGAGGCCGG GTTCAACGGC
GCGCGCCTGC ACCAGAAGGT GTTCGAGGAG CGCTTCCTCT ACCACGCGGA CCGCCTCGGC
TACCTCGTGT GGGGCGAGTT CGGCGACTGG GGGGTCGGCG GCGGCGGCCC GATCACCGAC
CACCAGCGCG TGACGGCGTC CTTCACCACG CAGTGGCTCG AGATCCTCGA GCGCGACGTC
TCGCACCCGT CGATCGTCGG CTGGTGCCCG CTCAACGAGA CGTGGCAGGT GCTGCACGAC
CGCATCACCG ACCTCGACGA CGTCATGCGC GGCATGTTCC TCGCGACGAA GCTCGCCGAC
CCGAGCCGGC CCGTGCTGGA CACGTCCGGG TACTCCCACC GCGTGCTCGA GACCGACGTG
TACGACTCGC ACGACTACGA GCAGGACCCG GCGAAGTTCC GCGAGAACCA GGCCGGCCTC
GCCGACGGGA CGCCGTTCCT CAACACGCAC GACGGCCGCA CCATCTCGCA GGGCTACGCC
GGCCAGCCGT ACTTCGTCAG CGAGTACGGC GGCATCTGGT GGAACCCGGA GGCCGCGGCG
TCGGTCGACG GCACCGACCG GGCGGAGTCG TGGGGCTACG GCCAGCGCGT GCAGGACGAG
GAGGAGTTCC AGGTCCGGTT CGCCGGGCTG ACGGACGTCC TGCTCGACGA CGAGGACATG
TTCGGCTACT GCTACACGCA GCTGACCGAC GTGTTCCAGG AGCAGAACGG CATCTACCGG
TTCGACCGGA GCACGAAGCT CGACGTCGAC CGGGTGCGCG CCGTGCAGCA GCGCGCGGCG
GCGATCGAGC TGGCCGACGG GGCAACGGCC GACGCGACGG TCTGA
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| Protein sequence | MSLPTSDVPR PEYPRPQMVR PDWLNLNGTW QFEIDGGDSG LERGLVESDL AGEITVPFAP
ESELSGVGNV DFMEAVWYRR TVTIPADWAG KKALLHFGAV DHDTTVWVNG TEVVRHRGGF
SPFTADLDGV AAPGEEATIV VRARDPRHTP QARGKQATKF INSECNYTRT TGIWQTVWLE
PVPHVHLRRP RITPDVATSS FTVVAPLSNN RPGFSVRVTV GDADGAIATA TARADVDLAP
SLRLEVPADR VHLWSAGDGH LYDVTVELLD ADGAVVDAVD SYAGLRSVSI DGKRILINGK
PVFQRLVLDQ GYYPDGIMTA PTDDALVRDI ELSLEAGFNG ARLHQKVFEE RFLYHADRLG
YLVWGEFGDW GVGGGGPITD HQRVTASFTT QWLEILERDV SHPSIVGWCP LNETWQVLHD
RITDLDDVMR GMFLATKLAD PSRPVLDTSG YSHRVLETDV YDSHDYEQDP AKFRENQAGL
ADGTPFLNTH DGRTISQGYA GQPYFVSEYG GIWWNPEAAA SVDGTDRAES WGYGQRVQDE
EEFQVRFAGL TDVLLDDEDM FGYCYTQLTD VFQEQNGIYR FDRSTKLDVD RVRAVQQRAA
AIELADGATA DATV
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