Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2877 |
Symbol | |
ID | 7860408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 3211777 |
End bp | 3212895 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643866974 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002882884 |
Protein GI | 229821358 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0137169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACA CCCCAGGTCA GGAGCCGGTC AAGCAGGGCA CCGCTCTCGA CCCGTTACCC CTGCCCGGAC CACCCCGCAG ACCCGGGATC AAGGACGTCG CCGCCCTGGC CGGGGTCTCG TGGAAGACGG TCTCGAACGT CATCAACGGG TCGGCCCCGG TCCGGGAGCA GACCCGCGCG CGCGTGGAGG CCGCCGTCGC GGAGCTCGGG TACCGCCCGA ACCTCTCCGG CCGCCACCTG CGGCAGGGGC GCAGCCACCT GCTCGCGCTC GCGTTCCCCG AGATCCGCAA CCCGTACTTC GCGGACCTCG CGCACGCGGT GATCCTGACG GCGCAGGAGC ACGGATACAC GGTGCTCATC GACGAGACGT TCGCCGACGC CGGCCGCGAG CGTGTCGTGG CCGAGGGGTT CCATGTGCAC CTGCTCGACG GCGTGTTGTT CTCCCCGCAG GCGCTGGCGC TGCACGACGT CGTCGCCGTG CGCGGGAACC TGCCGATGGT GATGATCGGC GAGCACGCCC TCCCCGCCCG GGGCGAGCCC GCCGTCGTCG ACCACGTGGT CATCGACAAC ACCGCGTCCG CGCGGGAGGC GACCGCGCAC CTGCTGGAGA CCGGCCGACG GCGGATCGCG TTCCTGGGCG GGGAGGCCGG GCTCTCGTCG GGCACCGGTG CGCTGCGCCG CGCCGGCTAC GAGGCAGCGC TCAACGCGGC CGGCCTGACC GCCACCTCGA CGTTCCTCGC GGCGCAGTAC ACGCGCCCGG TCGGCGCGGC GACGGTGTCG GCGGGCATCG CGGCGTTCCA GGGTCCCGAC GCGATCGACG CGCTCCTGTG CGCGAACGAC CAGCTCGCGG TCGGCGCCAT GCACGCGCTG CGCGAGGCGG GGCTGCGCGT GCCGCAGGAC GTCGCCGTGC TCGGCTGGGA CGACATCGAG GAGGGGCGCT ACTCCCACCC GACCCTCACG AGCGTGTCGC CGGACGTGGA GGCGCTGGCC CAGCTCGCCG TCGAGCTGCT CGTGTCGCGG ATCGAGGGTT CGCGCGAGCC GCCGCGTGTG CACATCGTCG CCCACACGCT CGAGGTGCGG GAGAGCACGG CACCGGCGAC ACCCGCGCCG ACCGCGTGA
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Protein sequence | MDHTPGQEPV KQGTALDPLP LPGPPRRPGI KDVAALAGVS WKTVSNVING SAPVREQTRA RVEAAVAELG YRPNLSGRHL RQGRSHLLAL AFPEIRNPYF ADLAHAVILT AQEHGYTVLI DETFADAGRE RVVAEGFHVH LLDGVLFSPQ ALALHDVVAV RGNLPMVMIG EHALPARGEP AVVDHVVIDN TASAREATAH LLETGRRRIA FLGGEAGLSS GTGALRRAGY EAALNAAGLT ATSTFLAAQY TRPVGAATVS AGIAAFQGPD AIDALLCAND QLAVGAMHAL REAGLRVPQD VAVLGWDDIE EGRYSHPTLT SVSPDVEALA QLAVELLVSR IEGSREPPRV HIVAHTLEVR ESTAPATPAP TA
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