Gene Bcav_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2877 
Symbol 
ID7860408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3211777 
End bp3212895 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content74% 
IMG OID643866974 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002882884 
Protein GI229821358 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0137169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACA CCCCAGGTCA GGAGCCGGTC AAGCAGGGCA CCGCTCTCGA CCCGTTACCC 
CTGCCCGGAC CACCCCGCAG ACCCGGGATC AAGGACGTCG CCGCCCTGGC CGGGGTCTCG
TGGAAGACGG TCTCGAACGT CATCAACGGG TCGGCCCCGG TCCGGGAGCA GACCCGCGCG
CGCGTGGAGG CCGCCGTCGC GGAGCTCGGG TACCGCCCGA ACCTCTCCGG CCGCCACCTG
CGGCAGGGGC GCAGCCACCT GCTCGCGCTC GCGTTCCCCG AGATCCGCAA CCCGTACTTC
GCGGACCTCG CGCACGCGGT GATCCTGACG GCGCAGGAGC ACGGATACAC GGTGCTCATC
GACGAGACGT TCGCCGACGC CGGCCGCGAG CGTGTCGTGG CCGAGGGGTT CCATGTGCAC
CTGCTCGACG GCGTGTTGTT CTCCCCGCAG GCGCTGGCGC TGCACGACGT CGTCGCCGTG
CGCGGGAACC TGCCGATGGT GATGATCGGC GAGCACGCCC TCCCCGCCCG GGGCGAGCCC
GCCGTCGTCG ACCACGTGGT CATCGACAAC ACCGCGTCCG CGCGGGAGGC GACCGCGCAC
CTGCTGGAGA CCGGCCGACG GCGGATCGCG TTCCTGGGCG GGGAGGCCGG GCTCTCGTCG
GGCACCGGTG CGCTGCGCCG CGCCGGCTAC GAGGCAGCGC TCAACGCGGC CGGCCTGACC
GCCACCTCGA CGTTCCTCGC GGCGCAGTAC ACGCGCCCGG TCGGCGCGGC GACGGTGTCG
GCGGGCATCG CGGCGTTCCA GGGTCCCGAC GCGATCGACG CGCTCCTGTG CGCGAACGAC
CAGCTCGCGG TCGGCGCCAT GCACGCGCTG CGCGAGGCGG GGCTGCGCGT GCCGCAGGAC
GTCGCCGTGC TCGGCTGGGA CGACATCGAG GAGGGGCGCT ACTCCCACCC GACCCTCACG
AGCGTGTCGC CGGACGTGGA GGCGCTGGCC CAGCTCGCCG TCGAGCTGCT CGTGTCGCGG
ATCGAGGGTT CGCGCGAGCC GCCGCGTGTG CACATCGTCG CCCACACGCT CGAGGTGCGG
GAGAGCACGG CACCGGCGAC ACCCGCGCCG ACCGCGTGA
 
Protein sequence
MDHTPGQEPV KQGTALDPLP LPGPPRRPGI KDVAALAGVS WKTVSNVING SAPVREQTRA 
RVEAAVAELG YRPNLSGRHL RQGRSHLLAL AFPEIRNPYF ADLAHAVILT AQEHGYTVLI
DETFADAGRE RVVAEGFHVH LLDGVLFSPQ ALALHDVVAV RGNLPMVMIG EHALPARGEP
AVVDHVVIDN TASAREATAH LLETGRRRIA FLGGEAGLSS GTGALRRAGY EAALNAAGLT
ATSTFLAAQY TRPVGAATVS AGIAAFQGPD AIDALLCAND QLAVGAMHAL REAGLRVPQD
VAVLGWDDIE EGRYSHPTLT SVSPDVEALA QLAVELLVSR IEGSREPPRV HIVAHTLEVR
ESTAPATPAP TA