Gene Bcav_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2871 
Symbol 
ID7860402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3205524 
End bp3206864 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content79% 
IMG OID643866968 
Productprotein of unknown function DUF58 
Protein accessionYP_002882878 
Protein GI229821352 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.547969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.051517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC CGTCAGGGGC GCCCCGGCCG TTCGCGGCCG TCGGGTCGGC ACGGCCCACG 
TGGCGACCCG GCCTCGCCGC CGCGTCGGTC GCCGTCGCGG CGATCCTGCT CGCGTTCGTC
GGACTGCTCG CGGCGCGCCC CGACGTCGCG CTCCTCGGCG CGCCGATGCT CCTCACCGTC
GCGTACGCGC TCGCCCGCCC TCGCGGCGTC CCCGCCGTGC GCCTGCGCGA GCAGCACGTG
CGGGCGGAGG CCGGGCGGTT CACCGGCGCG CTGGAGATCG ACGACGGCGG CGCCTCGACC
GTGCGTCTGC GGGTGAGCAC GCCGGGCTTC CGCAGCGTCG AGGCGCTCCT CGCCGCCGAC
GCCCGCGCCG AGGTGGCCGT CGTCAGCGCC CGGACCGGGC CCCAGGAGTT CTTCCGCACC
GACTGGATCG CGGAGGGCGT CGACGCGGCG TTCGTGACGG AGCCGCGGCT CGTGCCCGCC
GTCCGAGTCA CCGTCGAGCC CGCGATGCAC GCGCTCGGCC AGCAGCCGCT GCCGTTCCGG
CTGCTCGGCC TCACCGGGGC GCACACGGGC CGCCGGCCGG GTGACGGCGA CGACCTGCAC
GACATCGCCC CGTTCGCCCC CGGCGACCGC CTCCGCCGGA TCGACTGGCG GGTCACGGCC
CGGCGCGGCA CGCAGAGCGG GGCGGCGACG GAGCTGTACG TGCGCCGCAC CAGGGCGCGC
GCGGACGCCG TCGTCATGCT GGTCGTCGAC AGTCGTGACG ACGTCGGCGC CGACGTCGTC
ACGTGGGCGG GCGGGATCCC GGTCCCGCGC GACGAGCCGA CGTCCCTCGA CATCGCGCGC
GAGGCGGCGG CGTCGATCGG CCGGGCGTTC CTGGCCGGCG GCGACCGCGT GGGCCTCGAG
GACCTGTCGG TGCGGCGGCG CGGCGTCCGG CCGGGCTCGG GGCGTGCGCA CCTCGACCGC
ATCACGTACC GGCTCGCGCT CTCCCGCCCG GAGGGTGATC CGAGCCGCCG GCTCCGGCCG
CCGCAGGTCC CCTCCGGCGC CCTCGTGGTG CTGGTCTCGA CCTTCCTCGA CGCGCAGAGC
GCCCGGATGG CGCGCCTGTG GCGGGCGTCG GGCCACCGCG TCGTCGCCGT CGACGTGCTG
CCCGCGACCC GCACCGACCG CCTCGACGAC GCCGAGCTCA CCGCGTACCG GCTGGTCGCC
CTCGCCCGCT CGACGGCGCT CGAACGGCTG GTCCGGGAGG GCGTGGAGCT CGTCAGCTGG
ACCGGACCCG GGGGGCCGGT GGCGGCGTCG GTCGCGCTCG CCGCCCTGCG GCGCGCCCGC
CCCGCGGAGG CCCGCCGATG A
 
Protein sequence
MTTPSGAPRP FAAVGSARPT WRPGLAAASV AVAAILLAFV GLLAARPDVA LLGAPMLLTV 
AYALARPRGV PAVRLREQHV RAEAGRFTGA LEIDDGGAST VRLRVSTPGF RSVEALLAAD
ARAEVAVVSA RTGPQEFFRT DWIAEGVDAA FVTEPRLVPA VRVTVEPAMH ALGQQPLPFR
LLGLTGAHTG RRPGDGDDLH DIAPFAPGDR LRRIDWRVTA RRGTQSGAAT ELYVRRTRAR
ADAVVMLVVD SRDDVGADVV TWAGGIPVPR DEPTSLDIAR EAAASIGRAF LAGGDRVGLE
DLSVRRRGVR PGSGRAHLDR ITYRLALSRP EGDPSRRLRP PQVPSGALVV LVSTFLDAQS
ARMARLWRAS GHRVVAVDVL PATRTDRLDD AELTAYRLVA LARSTALERL VREGVELVSW
TGPGGPVAAS VALAALRRAR PAEARR