Gene Bcav_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2864 
Symbol 
ID7860395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3198394 
End bp3199221 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID643866961 
Productthymidylate synthase 
Protein accessionYP_002882871 
Protein GI229821345 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.292477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCA CCGACGCGGC CGCCGCCCCC CGGACCGACA CGCAGTACGA GGATCTCCTC 
GCCGAGGTGC TCGCCGACGG CGCGCACAAG TCCGACCGCA CCGGGACCGG CACGCGGAGC
GTGTTCGGCC GGCAACTGCG CTACGACCTG CGCCACTCCT TCCCGCTCGT CACCACGAAG
CGGGTCCACG TGAAGTCCCT CGTGCACGAG CTCCTGTGGT TCCTGCGCGG CGAGTCGAAC
GTGCGGTACC TGCAGGAGAA CGGCGTGCGG ATCTGGAACG AGTGGGCGGA CGACGACGGC
GAGCTCGGCC CGGTCTACGG CGTCCAGTGG CGCTCGTGGC CCACGCCCGA CGGTGGCCAC
ATCGACCAGA TCGCGCGTGT GGTGGAGAAC CTGCGGACGG ACCCGGACTC GCGGCGGCAC
ATCGTCTCCG CGTGGAACGT GGCCGAGCTC GACGACATGG CGCTCGCGCC GTGCCACGCC
CTGTTCCAGT TCTACGTGGC GAACGGCGAG CTCTCGTGCC AGCTGTACCA GCGCAGCGCC
GACCTGTTCC TCGGCGTGCC GTTCAACGTC GCGAGCTACT CGCTGCTCAC CCACATGGTC
GCGCAGCAGA CCGGGCTGGC CGTCGGCGAC TTCGTGTGGA CGGGCGGGGA CTGCCACATC
TACGACAACC ACACGGAGCA GGTCCGGGAG CAGCTGGCGC GGGACCCGTA CCCGTTCCCG
ACCCTCGCGC TGCGCCAGGC GCCGTCGATC TTCGACTACG CCTACGCCGA CGTCGAGGTG
GTGGGCTACC AGCACCACGC CCCGATCGCC GCGCCGATCG CCGTCTGA
 
Protein sequence
MTLTDAAAAP RTDTQYEDLL AEVLADGAHK SDRTGTGTRS VFGRQLRYDL RHSFPLVTTK 
RVHVKSLVHE LLWFLRGESN VRYLQENGVR IWNEWADDDG ELGPVYGVQW RSWPTPDGGH
IDQIARVVEN LRTDPDSRRH IVSAWNVAEL DDMALAPCHA LFQFYVANGE LSCQLYQRSA
DLFLGVPFNV ASYSLLTHMV AQQTGLAVGD FVWTGGDCHI YDNHTEQVRE QLARDPYPFP
TLALRQAPSI FDYAYADVEV VGYQHHAPIA APIAV