Gene Bcav_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2815 
Symbol 
ID7861223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3140020 
End bp3141189 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content75% 
IMG OID643866912 
ProductROK family protein 
Protein accessionYP_002882822 
Protein GI229821296 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.37172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGA TCCAGCCGAC GCCGTCGGCG CACCGCGCCA CGGGGTGGGT CGAGCCGGAG 
GGCACAGCGC ACGCCGTGGC CCTGGAGGTG CTGCTCGCGG GGCCGCTCTC GCGTGCCGAG
CTCGCCCGCC GGATGAATCT CTCGCAGGCG AGCCTGTCGC GGCTGACGAA GCCGTTGCTC
GCCGGCGGGC TCCTCGTCGA GGCCGGCGCG GACCCGGGTC CGGGGCGGGT CGGCCGCCCC
GGTCGGCCCC TCGACGTCGT CCCGGACTCC CACCACTTCG TGGGTGTCAA GATCACCGGC
ACGGACGTCC ACGGCGTCCT GACGACGCTG CGCTGCGAGG AGGTCGCCCG TGCCGACGCG
CCGCTCGCCG GGCACGACGT CGCTGACGTG GTCGCGACCG TTGCCTCCGT CGTCGCCCGC
CTGGCGGAGC ACGCTCCTGC CGTGACCGGG CTCGGCCTGA GCGTCGGAGG GCGGGTCCGC
GACGGTCGCG TCGTGCAGGA CGCGATGTTC CTCGAGTGGG ACGAGGTCCA CCTCGCCGAC
GAGCTCGAAC GAGCGACAGG GTTCCCGGCG GTGGTCGGCA ACGATCTCGC CGCGCTGGCG
CAGGCGGAGC TGTGGTTCGG CGCCGGCCGA GGCTGGGACA CGTTCGCCGT GCTGACGATC
GGCGCCGGGG TCGGGTTCGG CCTCGTCGCC GAGCGACGGG TCATCACCAG CGACGATGCC
GGTGTCGGAC TCGTCGGGCA CATCCCGCTC GAGCCGGGGG GACCGCAGTG CCCGCTCGGT
CACCGCGGCT GCGCGTCGGC GATGCTCGCG ACGTCGAGCG TCGTGGCGCA GGCGTCGGTC
GGGCTCGGCC GGCTCGTGAC GTATGAGGAC GTGCTGCGAC TGGCCGCCGA CGGCGACCCG
GTGGCCCGCT CGGTCGTCCG GGGCTCCGCC GCGGCGCTGG GTCGGCTCGC GGCGCTAGCG
GCCAACCTCA CGTTCGCGTC GACGATCGTG CTCGCGGGGG AGGGAGTCGG GCTCATGGCC
GTCGCCGGGG ACGTGGCGCG GGCGGAGCTC GACGCCCACC GGCACCCGGC CGCGAGCCCG
GTCGAGCTCC TCGTGAGGGA TGCCGACTTC TCCGAGTGGG CGCGGGGCGC GGCGGCCGTC
GCGATCCAGT CGTACGTGCT GAGCCGCTGA
 
Protein sequence
MPPIQPTPSA HRATGWVEPE GTAHAVALEV LLAGPLSRAE LARRMNLSQA SLSRLTKPLL 
AGGLLVEAGA DPGPGRVGRP GRPLDVVPDS HHFVGVKITG TDVHGVLTTL RCEEVARADA
PLAGHDVADV VATVASVVAR LAEHAPAVTG LGLSVGGRVR DGRVVQDAMF LEWDEVHLAD
ELERATGFPA VVGNDLAALA QAELWFGAGR GWDTFAVLTI GAGVGFGLVA ERRVITSDDA
GVGLVGHIPL EPGGPQCPLG HRGCASAMLA TSSVVAQASV GLGRLVTYED VLRLAADGDP
VARSVVRGSA AALGRLAALA ANLTFASTIV LAGEGVGLMA VAGDVARAEL DAHRHPAASP
VELLVRDADF SEWARGAAAV AIQSYVLSR