Gene Bcav_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2813 
Symbol 
ID7861221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3138323 
End bp3139528 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content75% 
IMG OID643866910 
Productaminotransferase class I and II 
Protein accessionYP_002882820 
Protein GI229821294 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.140428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.350751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAC CACGCTGGGT CGACGTCGCC CGTGCCGCCG GCCTCATGGG CGACGACGGC 
GTCCCGCGGC CCACGATCTT CGCCGAGATG AGCGCCCTCG CCACGGCCAC GGGATCGCTC
AACCTCGGCC AGGGCTTCCC GGACGTCGAC GGCCCGGCGT GGATCCGCGC GGCAGCGATG
CGCGCCATCG ACGACGGCGC GAACCAGTAC CCGCCCGGCC CCGGCATCCC GGAGCTGCGC
CACGCCGTCG CCCGGCACCA GCACCGGCAC TACGGGATCG ACCTCGACCC CGACCGCCAG
GTGCTCGTGA CGACCGGGGC CACGGAGGCG CTCGCCGCCG CGGTGCTCGC TCTCGCCGGC
CCCGGCGACG AGGTGCTGAC GCTCGAGCCG TACTACGACT CGTACGCGGC CACGATCGCC
CTCGCCGGCG CCACGCACAC CACGGCGCCG CTCGTCGCGA CGCCGGACGG GTTCCGGCTC
GACGTCGCGG CCCTCCGAGC GGCAGTGACG CCGCGCACGC GCGTGATCCT CCTCAACACC
CCGCACAACC CGACCGGGAC GGTGCTCACC CGCGACGAGC TGGAGGCGGT GGCGGCCCTC
GCGCGCGAGG CGGACGCCGT CGTCGTCACC GACGAGGTGT ACGAGCACCT CACGTACGAC
GACGCCCGCC ACGTCCCGAT CGCCACGCTC CCGGGCATGG CGGAGCGCAC GCTCACGATC
TCGTCCTCCG GCAAGACGTT CTCGCTCACG GGCTGGAAGA TCGGCTGGGT GAGCGGGCCG
GCCCCGCTCG TCGACGCGGT CCGCACGGTC AAGCAGTTCC TCACCTACGT CTCGGGCGCG
CCGTTCCAGC CGGCGATCGC CCGGGCGCTG GACGACGACG ACGCGCCGCG CGAGCTCGCC
GCCAGCCTCG CCGCACGCCG CGACCTGCTC TGTGCCGGCC TGCGGGACGT GGGGTTCGAC
GTCGTCGTGC CGGCCGGCAC GTACTTCGTG CTGGCCGACG CCGCCCCGCT CGGCTGGACC
GACGGCGCCG CCCTCGCCCG AGCGATGCCC GAGCGGGCGG GCGTCGTGTG CGTCCCCGTG
AGCGCGTTCT GCCGGACCGA CGACGCCGTC GCGACGGCGT TGCGCTCGTG GGTGCGGTTC
ACGTTCGTCA AGAGCGAGGA CGTGCTGCGC GACGCCGTCG AGCGCCTGCA CGCGCTCCGC
GGCTGA
 
Protein sequence
MSTPRWVDVA RAAGLMGDDG VPRPTIFAEM SALATATGSL NLGQGFPDVD GPAWIRAAAM 
RAIDDGANQY PPGPGIPELR HAVARHQHRH YGIDLDPDRQ VLVTTGATEA LAAAVLALAG
PGDEVLTLEP YYDSYAATIA LAGATHTTAP LVATPDGFRL DVAALRAAVT PRTRVILLNT
PHNPTGTVLT RDELEAVAAL AREADAVVVT DEVYEHLTYD DARHVPIATL PGMAERTLTI
SSSGKTFSLT GWKIGWVSGP APLVDAVRTV KQFLTYVSGA PFQPAIARAL DDDDAPRELA
ASLAARRDLL CAGLRDVGFD VVVPAGTYFV LADAAPLGWT DGAALARAMP ERAGVVCVPV
SAFCRTDDAV ATALRSWVRF TFVKSEDVLR DAVERLHALR G