Gene Bcav_2737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2737 
Symbol 
ID7860175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3042905 
End bp3043783 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content75% 
IMG OID643866834 
Productglutamate racemase 
Protein accessionYP_002882744 
Protein GI229821218 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.364406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG CACCCATCGG CATCTTCGAC TCCGGCGTCG GCGGGCTGAC CGTCGCCCGT 
GCGGTGCTGG ACCAGCTGCC GCACGAGTCG GTGCTCTACG TGGGCGACAC GGCCCGCACG
CCGTACGGGC CGCGGCCGAT CGCGCAGGTG CGCGAGTACT CGCTCGAGAT CCTCGACTCG
CTCGTCGCCT CCGGCGTCAA GGCGCTCGTG ATCGCGTGCA ACTCCGCGTC GGCCGCGATG
CTGGCCGACG CACGGGAACG GTACGAGGGC GACGGCGTCC CGGTCGTCGA GGTCATCCGG
CCCGCCGTCC GCCGGGCCGC GGCCGCCACC CGGAACGGGA GGATCGGCGT CATCGGCACG
CGGGCGACGA TCTCCTCCCG CGCCTACGAG GACGCGTTCG CGGCCGCCCC CCAGCTGCAG
CTGCACACCC GGGCGTGCCC CGACTTCGTC GAGCTCGTGG AGGACGGCGA GACGTCCGGG
CCGGCGGTCC TCGCCAGCGC CCACGCGTAC CTCGACCCGC TGCGCGACGC GGGCGTCGAC
ACGCTCGTGC TCGGCTGCAC TCACTACCCG CTGCTCGCCG GGGCGATCTC GTACGTCATG
GGCGAGGGCG TCACGCTCGT CTCCTCGGCC GAGGAGACGG CGCTGGACGT GTACCGCACG
CTCGTCGCGC ACGACCTGCT GCGCTCGGCC GACGGTGCCC GAGGAGACGA CGGCGCCCGG
TCCGCGCCGC GGCACCGGTT CCTCGCGACC GGCGACCCCG CGGCCTTCAC CCGCCTGGCG
CGCCGCTTCC TCGGGCCCGA GGTGGACGAC GTGCACGACG CCGTGGAGGT CACCGGCGAG
ATCCCGCGGA TCACGGCACC CCTGCGGGGC ACGCGATGA
 
Protein sequence
MSDAPIGIFD SGVGGLTVAR AVLDQLPHES VLYVGDTART PYGPRPIAQV REYSLEILDS 
LVASGVKALV IACNSASAAM LADARERYEG DGVPVVEVIR PAVRRAAAAT RNGRIGVIGT
RATISSRAYE DAFAAAPQLQ LHTRACPDFV ELVEDGETSG PAVLASAHAY LDPLRDAGVD
TLVLGCTHYP LLAGAISYVM GEGVTLVSSA EETALDVYRT LVAHDLLRSA DGARGDDGAR
SAPRHRFLAT GDPAAFTRLA RRFLGPEVDD VHDAVEVTGE IPRITAPLRG TR