| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2734 |
|---|
| Symbol | |
|---|
| ID | 7860172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3038459 |
|---|
| End bp | 3039298 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643866831 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_002882741 |
|---|
| Protein GI | 229821215 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0760609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCC ACCCCACCGA CGCCCCCGCC CCGACGACCG TGCGAGCGGA CGGCCGCGCC
CCGGACGACC TCCGGCCGAT CCGGATCACG CGGGGCTGGC TCGACGCCGC CGAGGGCAGC
GTGCTCGTGG AGTTCGGGAA CACGCGCGTT CTCTGCGCGG CGTCCTTCAC CGCGGGCGTC
CCGCGCTGGC GCAAGGGGTC GGGCGAGGGC TGGGTCACCG CCGAGTACGC GATGCTGCCG
CGGGCGACGA ACACGCGCAA CGACCGCGAG TCCGTGCGCG GCCGGATCGG TGGCCGGACG
CACGAGATCT CCCGGCTGAT CGGCCGCTCG CTGCGGGCCG TCATCGACGT CGCCGCCCTC
GGCGAGAACA CGATCGTCGT CGACTGCGAC GTGCTGCAGG CCGACGGCGG CACCCGCACG
GCGGCGATCA CCGGCGCGTA CGTGGCGCTC GCCGACGCCG TGGCCTGGGG GCTCGAGCAC
GGGGAGGTCC GGCGCGGGGC GCACGTGCTG CGCGACTCGG TCAGCGCCGT GAGCGTGGGC
ATCGTCGACG GCGCTCCGCT CCTCGATCTG CCGTACGCGG AGGACGTGCG GGCCGAGACG
GACATGAACG TCGTCGTCAC CGGGTCCGGG TCGTTCGTCG AGGTGCAGGG CACGGCGGAG
GGTGCGCCGT TCGACCGCGC CGAGCTCGAC GCGCTGCTCG ACCTCGCGCT CGTGGGCACG
CGCCAGCTCG CGGCCGTGCA GGCCGCCGCG TTGGAGGCAC CCGCCCCGGG GCACCCGCCG
CACCCGCAGT CGGACGCCGT CGCCGGTGAC GAGGCGCGGT CCGTCGCCGG GCTCGCGTGA
|
|---|
| Protein sequence | MSAHPTDAPA PTTVRADGRA PDDLRPIRIT RGWLDAAEGS VLVEFGNTRV LCAASFTAGV
PRWRKGSGEG WVTAEYAMLP RATNTRNDRE SVRGRIGGRT HEISRLIGRS LRAVIDVAAL
GENTIVVDCD VLQADGGTRT AAITGAYVAL ADAVAWGLEH GEVRRGAHVL RDSVSAVSVG
IVDGAPLLDL PYAEDVRAET DMNVVVTGSG SFVEVQGTAE GAPFDRAELD ALLDLALVGT
RQLAAVQAAA LEAPAPGHPP HPQSDAVAGD EARSVAGLA
|
|---|
| |