Gene Bcav_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2724 
Symbol 
ID7860162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3028757 
End bp3029818 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content73% 
IMG OID643866821 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002882731 
Protein GI229821205 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.632529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG TGACCGACCC GCCCGTGCTG TCCGCCGTCG ACGTGACGAA GCACTTCGTG 
GTGCGCGGGG CCGTCGGCGA CTCCGCGGTC GTGCGGGCGG TCGAGGACGC CTCGGTGGAC
CTGCACGCGG GCCGGATCGT CGCCGTCGTC GGCGAGAGCG GCAGCGGGAA GACCACGCTC
GCCCGCCTGC TGGCCCGGTT CTACGAGCCG ACGTCGGGGG AGGTCCGGAT CGAGGGAGCG
CCCGCGTCGG CGCGCTCGCA GCGCGCCTAC CACCAGGACG TCCAGCTGAT CTTCCAGGAC
CCGTTCGGAT CCCTGAACCC GGTGCACCGC GTGCGGCACA ACCTCGACCG CGCCCTGCGC
ATCCACGACA GGCGACTCTC CGCCGCCGAG CGACGCCGCC GCGCCGTCGA GCTCCTCGAA
CGCGTGAGCC TCACGCCGGG GGAGGACTTC CTCGAGAAGT TCCCCCACGA GCTGTCCGGC
GGGCAGCGGC AGCGCGTCGT CATCGCCCGG GCGCTGGCCG TCGGCCCGAA GGTGCTGCTC
GGCGACGAGC CGATCTCGAT GCTCGACGTG TCGATCCGGC TGGAGATGCT CAACCTCCTG
GACCGGCTGC GCCGCGAGGA AGGTCTAGCG CTGCTGTACA TCACGCACGA CATCGCGAGT
GCCCGCTACG TGTGCGACGA CGTCGTCGTC ATGTACGCCG GCCAGATGAT CGAGGGCGGT
CCGAAGGACG ACGTCATCGC GCGGCCGGCG CACCCGTACA CCAAGCTTCT GGTCGAGTCC
TCCCCGGACC CGGACCGCGT GGGCACCGTG TCACGGGAGG AGCTGTTCGA CGACGCCGAG
GCGCTCGGCG AGCCGCCGAG CCTCATCGAG CCGCCGGCCG GGTGCCGGTT CCACCCACGG
TGCCCGTTCG CGATGGAACG CTGCCGCGTC GAGGCTCCGC CGCGCGCCGA GCTCGGCGGG
GGCCGGTGGG CGCGGTGCTG GCTGCACGAG GCGGGTCGGG CCGACGAGAT CGGCGCCTCC
ACGTTCTCGC AGGCGCTGGC CGCCCGGGGG GCCGTCTCGT GA
 
Protein sequence
MSTVTDPPVL SAVDVTKHFV VRGAVGDSAV VRAVEDASVD LHAGRIVAVV GESGSGKTTL 
ARLLARFYEP TSGEVRIEGA PASARSQRAY HQDVQLIFQD PFGSLNPVHR VRHNLDRALR
IHDRRLSAAE RRRRAVELLE RVSLTPGEDF LEKFPHELSG GQRQRVVIAR ALAVGPKVLL
GDEPISMLDV SIRLEMLNLL DRLRREEGLA LLYITHDIAS ARYVCDDVVV MYAGQMIEGG
PKDDVIARPA HPYTKLLVES SPDPDRVGTV SREELFDDAE ALGEPPSLIE PPAGCRFHPR
CPFAMERCRV EAPPRAELGG GRWARCWLHE AGRADEIGAS TFSQALAARG AVS