Gene Bcav_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2715 
Symbol 
ID7860153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3016955 
End bp3018211 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content73% 
IMG OID643866812 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002882722 
Protein GI229821196 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.282195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC AGGCCCGCCG CGTGCAGGGC GTGTACCTCA CGCTCATGCT CGGGAACACG 
CTGGCCGCGT CGTTCATCTG GGGCATCAAC ACGCTCTTCC TCCTCGACGC CGGCCTCACG
AACTTCGAGG CGTTCGGCGC GAACGCGTTC TTCACCGTGG GCATGGTGCT GTTCGAGGTG
CCCACCGGCG TCGTCGCCGA CACGCGCGGC CGGCGGACGT CCTACCTGCT CGGCACCGTG
ACGCTCGCGG CGACGACGGC GCTGTACTAC CTCATGTGGC AGGTGGGGGC GCCGTTCTGG
GCGTGGGCGG TGGTCTCGGC GCTGCTCGGC CTCGGGTTCA CGTTCTTCTC CGGGGCGGTC
GAGGCCTGGC TCGTCGACGC GCTGCACCAC ACGGGCTACG ACGGCGCCCT CGAGACGGTC
TTCGGGCGCG GGGCGATGGT CTCGGGTGTG GCGATGCTCG GAGGCTCCGT CGCGGGTGGG
GTGATCGCGC AGGCCACGTC GCTGGGCGTG CCGTTCCTGC TCCGCGTCGG CGTGCTGCTC
GCGATGTTCG TCGTGGCCTA CGCCCTGATG CGCGACCTGG GGTTCGCGCC CGAGCGGTCC
GCCGGGCCGT GGCAGGAGGT CCGCGCCACC CTGTCGGCGT CGATCGAGCA CGGGCTGCGC
AACCCCCCGG TGCGGTGGAT CATGCTGGCC GCCCCGTTCG CCTCCGGTGT CGGCTTCTAC
ACGTTCTACG CGCTCCAGCC GTACCTCCTC GAGCTGTACG GCGACCCCGG CGCCTACTCG
GTGGCCGGGC TCGCGGCGGC GGCGATCGCC GGCGCGCAGG TCCTGGGCGG GTACGCGGCG
CCTCGCGTGC GCGCCCTGGT CCGCCGCCGC ACCACGGTGC TCATCGCCGG CGCGGTGGTG
ACCGCCGTCA TCCTGGCGCT CCTCGGCGTC ACCGACGTGT TCTGGGTCGC CCTGGTGCTC
CTCGTGCTCT GGGCCCTCAT CGGGGCCGCG GAGATGCCGG TGCGGCAGGC CTACCTCAAC
GACCTCATCC CGTCGCGGCA ACGGGCGACG GTGCTCTCGT TCGACTCGCT CATGGGGAGC
AGCGGCGGCG TCGTCATCCA GCCCGCACTC GGGCGGGCCG CCGACCTGTA CGGATACCCG
ACGTCGCTCG CGCTCGGGGC CATCGTGCAG GCGCTGTCCG TGCCGTTCCT GGTCGGGAGC
CGGCGGGAGC GCGCTCCGGC CGACACGTCG GTCGCCGGGC CGACGCCGCC CGCCTGA
 
Protein sequence
MNPQARRVQG VYLTLMLGNT LAASFIWGIN TLFLLDAGLT NFEAFGANAF FTVGMVLFEV 
PTGVVADTRG RRTSYLLGTV TLAATTALYY LMWQVGAPFW AWAVVSALLG LGFTFFSGAV
EAWLVDALHH TGYDGALETV FGRGAMVSGV AMLGGSVAGG VIAQATSLGV PFLLRVGVLL
AMFVVAYALM RDLGFAPERS AGPWQEVRAT LSASIEHGLR NPPVRWIMLA APFASGVGFY
TFYALQPYLL ELYGDPGAYS VAGLAAAAIA GAQVLGGYAA PRVRALVRRR TTVLIAGAVV
TAVILALLGV TDVFWVALVL LVLWALIGAA EMPVRQAYLN DLIPSRQRAT VLSFDSLMGS
SGGVVIQPAL GRAADLYGYP TSLALGAIVQ ALSVPFLVGS RRERAPADTS VAGPTPPA