| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2714 |
|---|
| Symbol | |
|---|
| ID | 7860152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3015352 |
|---|
| End bp | 3016917 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643866811 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_002882721 |
|---|
| Protein GI | 229821195 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.101766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.124746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCA TGTCAGGGGC GACCGGGGCA GGGACGACGC AGGCAGAGGG ACGAGGCTTC
CTGCGACGCA AGCCGATCGA GGACGCGCTC GCGTCCGTCG ACGACCCGGA GCGCTCGCTC
AAACGGGACC TGACCGCCTG GGACCTGGCG GTGCTCGGCG TCGCCGTCGC CGTCGGTGCG
GGGATCTTCT CCGTCGGGGC GAACGCGGCA GCGAACTACG CGGGACCCGC CGTCATCGTC
TCGTTCCTCA TCGCCTCGGT CGTGTGCGCG CTCGCCGTGA TGTGCTACGC CGAGTTCGCC
TCCACGATCC CGGTCGCGGG GTCCGCCTAC ACGTTCTCCT ACACGACGAT GGGGGAGTTC
GTCGCGTGGA TCATCGGCTG GGACCTCATC CTCGAGATGC TCCTCGCCGC CGCGGTGATC
GCGAAGTTCT GGGGTGTCTA CCTCGGCGAC GCGTTCTCGC TCTTCGGGAT CGACGTGCCC
ACCACCGTGC ACGTGGGCAG CGTCGCGCTC GACTGGGGAC CGGTGTTCAT CGTCGCCGTC
TTCACGGCCC TGCTCGCGAT CGGCACCAAG CTCTCGACGC GCGTGAACTC GGTGTTCACG
ATCATCAAGG TCGGCATCAC GCTGTTCGTC ATCGTCGCCG GGTTCGCGTA CGTCCGGCTG
GAGAACTTCT CCCCGTTCGT CCCGCCCGCC GAGCCCGCGC CGGAGCGGTC GAACGTCGAG
CAACCGCTGT TCGGGTTCCT CACGGGGCTC GAGCCCTCGA TGTACGGGAC GCTCGGGATC
CTTGCCGGGG CCGCGCTCGT GTTCTTCGCG TTCATCGGGT TCGACGTGGT CGCGACGACG
GCGGAGGAGA CCCGGGAGCC GCAGCGCGCC ATCCCGCGGG GCATCCTCGG CGGGCTCGCG
ATCGTGACGG TGCTGTACGT GCTCGTGACG CTGGTGGTCA CCGGCATGGT GTCCTACCGG
GAGCTCGCGG CGAGCGACTC CCCGTCGCTG ACGACGGCGT TCATCCTCGT GGGCGCCGAC
TGGGCGGGGC GGGTGATCTC CGTCGGCATC CTCATCGGCC TGACGACGGT GATCATGGTG
CTGCTGCTCG GACTCACCCG TGTCGTGTTC GCGATGAGCC GGGACGGCCT GCTCCCGCGC
GGCGTCTCGC GCACCTCGCG GCGGTTCCAC ACGCCCGTGC GGCTGCAGAT CGGCACCGGG
ATCGTCGTGG CGCTGATCGC CGGGCTCGCC CAGGTCGAGC TCCTCGAGGA GATGATCAAC
ATCGGCACGC TGTCGGCGTT CGTGCTCGTC TCCTTCGGCA TCCCGGTGCT GCGCCGGAGG
CGGCCCGACC TCAAGCGGTC GTTCCGCGTC CCGTGGTCGC CGGTGCTGCC CATCGTGTCC
GGCGTCGCCT GCCTGTGGCT GATGACGAAC CTGACGACGC TGACGTGGCT GCGGTTCCTC
GCGTGGCTCG CCCTCGGGGT CGCGATCTAC CTCGGCTACT CCTACCGGCA CAGCGTGCTG
GCCCGGGCGG CGGCAGGCTC GGCGCCCGAC CCGCCGAAGG ACGACGCCGC TACTCCACCG
GCGTAA
|
|---|
| Protein sequence | MAGMSGATGA GTTQAEGRGF LRRKPIEDAL ASVDDPERSL KRDLTAWDLA VLGVAVAVGA
GIFSVGANAA ANYAGPAVIV SFLIASVVCA LAVMCYAEFA STIPVAGSAY TFSYTTMGEF
VAWIIGWDLI LEMLLAAAVI AKFWGVYLGD AFSLFGIDVP TTVHVGSVAL DWGPVFIVAV
FTALLAIGTK LSTRVNSVFT IIKVGITLFV IVAGFAYVRL ENFSPFVPPA EPAPERSNVE
QPLFGFLTGL EPSMYGTLGI LAGAALVFFA FIGFDVVATT AEETREPQRA IPRGILGGLA
IVTVLYVLVT LVVTGMVSYR ELAASDSPSL TTAFILVGAD WAGRVISVGI LIGLTTVIMV
LLLGLTRVVF AMSRDGLLPR GVSRTSRRFH TPVRLQIGTG IVVALIAGLA QVELLEEMIN
IGTLSAFVLV SFGIPVLRRR RPDLKRSFRV PWSPVLPIVS GVACLWLMTN LTTLTWLRFL
AWLALGVAIY LGYSYRHSVL ARAAAGSAPD PPKDDAATPP A
|
|---|
| |