Gene Bcav_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2705 
Symbol 
ID7861376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3007467 
End bp3008171 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID643866802 
ProductGntR domain protein 
Protein accessionYP_002882712 
Protein GI229821186 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.642006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGG TCGTGCGGAA GGACCTGTCG GCGGAGCTGG CCGACCGCGT CGTCCGGCTC 
ATCGCCGAGC GCGGACTCCA GGTCGGCGAG TCCATCGACT CCGTGCGGAC CCTCGCCACA
CGGTTCGAGG TGGCCGTGCC CACGGTTCGT GAGGCGCTGC GCCGCCTCGA GGGGCTCGGC
ATCCTGGAGT TCCGGCACGG GTCCGGCATC TACGTCGGTC CCAACGCGGG CCGGATGGTC
CTCGCCAACA CGATGAACCC GCCGGCCGAC GTCGACCAGC TCGTCGAGCT GCTCGAGGCG
CGGCTCGTCA TCGAGCCCGG GATCGCGGAG CTCGCCGCGC GGGCGCACGA CGCGCCGGCC
CTGCAGCTCG TCGAGGAGAC GCTCGCCGAG GCGGAGCGCT GCCTCGAGAC CGGGGCGGCG
AACCTGTGGC ACGTCAACAT GGATCTCCAC CGCGCCATCG CCCGCGCGAC GGGCAACGCC
GTCCTCGGCG ACACGATGGA CACGCTCGCC GAGGTCCACG GTGACGACCA GCGGCAGATC
CTGCGACTCC ACGGCGACCC GCGGGCGGAC TTCGACGAGC ACCGCGCGAT CGTCGACCTC
ATCGCCGCCG GTGACGGCGC GGGTGCGCGC GACGCGATGC ACACGCACCT CGAGGACGTC
GTCCGCATCA TCCGCTCGAC CCGCACGGGA GGTGACGCGA CCTGA
 
Protein sequence
MDPVVRKDLS AELADRVVRL IAERGLQVGE SIDSVRTLAT RFEVAVPTVR EALRRLEGLG 
ILEFRHGSGI YVGPNAGRMV LANTMNPPAD VDQLVELLEA RLVIEPGIAE LAARAHDAPA
LQLVEETLAE AERCLETGAA NLWHVNMDLH RAIARATGNA VLGDTMDTLA EVHGDDQRQI
LRLHGDPRAD FDEHRAIVDL IAAGDGAGAR DAMHTHLEDV VRIIRSTRTG GDAT