Gene Bcav_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2701 
Symbol 
ID7861587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3002967 
End bp3003812 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID643866798 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002882708 
Protein GI229821182 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.595775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.4677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCT CCGTCTCGCA GGGCTCCACC GCCTCGCTGT GGGTCCGCCG CATCGTCCTC 
GTCGTGCTCG GGCTGATCTG GCTCGTCCCC GTCTACCTGT TCCTCGCCAA CGCCGCGAAG
ACGACGGAGT CCTACGGCAT CTCCTCGGTC TGGGCGCCCG AGGGGATCGC CGGCCTGTGG
TCGAACATCG CCGACGCCTG GGACCGGGGG CGCCTCTCGA GGGGCTTCCT GAGCACCGCC
GTCTACGCGC TCGTCGCCCC GCTCCTGGCC GTCGTCGTCG GCGCCGCGGC CGGCTTCGCG
ATCGTGGCGC TGCGGCTGCG CCACGGGTTC GTCTGGTTCG TCGTCATCTT CGCGTCCACG
ATCTTCCCGC TGCAGATGAT CCTCATGCCG CTGTTCCTCG GGTACGCGGA GACCGGCCTG
TACGACAGCC GCCAGGGCAT GATCCTCGTC TACACGGCGA TCAGCGTGCC GTTCGCGGCG
TTCGTGATGC GGAACTTCTT CTCCGGCATC GCGCACCAGG TGTTCGAGGC GGCCGTCGTG
GACGGCGCGG GGACGTGGCG GATCTTCTGG CGGATCTACC TCCCGATGTC GATGAGCGCC
CTGGTCGCCG TGTACATCCT GCAGGCCACG CTCATCTGGA ACGACCTGCT GCTCGGTCTC
ACGCTCGCGC AGTCCGAGAC GACACGGCCG CTCATGCCGG CGCTGTCGGC CATGCAGAGC
ACGTACGGCG GCTCGACGAT GCCCACGGTG CTCGCGGGCG GCCTGCTGGT CTCGATCCCG
ACGGTCGCCC TGTTCCTGCT GACGCAGCGC GTGTTCTCCC GCGGGCTGTC GCTCGGCCAG
TTCTGA
 
Protein sequence
MAASVSQGST ASLWVRRIVL VVLGLIWLVP VYLFLANAAK TTESYGISSV WAPEGIAGLW 
SNIADAWDRG RLSRGFLSTA VYALVAPLLA VVVGAAAGFA IVALRLRHGF VWFVVIFAST
IFPLQMILMP LFLGYAETGL YDSRQGMILV YTAISVPFAA FVMRNFFSGI AHQVFEAAVV
DGAGTWRIFW RIYLPMSMSA LVAVYILQAT LIWNDLLLGL TLAQSETTRP LMPALSAMQS
TYGGSTMPTV LAGGLLVSIP TVALFLLTQR VFSRGLSLGQ F