| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2692 |
|---|
| Symbol | |
|---|
| ID | 7861578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2987826 |
|---|
| End bp | 2988584 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643866789 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002882699 |
|---|
| Protein GI | 229821173 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.733393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0930337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGT TCGAGCTCGA CGCCTTGACC AAGGACTTCT CCGGCACGCT CGCGGCGGAC
GCCGTGTCGG TGAGCGTGCC GGTCGGGTCC CTCACCGGCC TGGTCGGCCC GAACGGCGCC
GGCAAGACGA CGTCGCTCTC GATGGCCGTC GGCCTGCTGC GCCCGGACTC CGGCACCGCC
CGGGTGCACG GCATCGACGT CTGGGCGGAC CCGACGCGCG CGAAGGCGAT GCTCGGTGTC
CTGCCGGACG GCCTCGCCCT CCCGGAACGA CTGACCGGCG CGGAACTGCT GCGCTACTGG
GGACTCCTCC GCGGCATGGC GCCGGACGTC GTCGCCTCAC GGACCGCCGA GCTGCTGCGG
ATCCTCGAGC TCGACGAGGC GGAGGCCAAG GGCGTCCTCG TCATCGAGTA CTCCACCGGG
ATGCGCAAGA AGATCGGGCT CGCGACAGCG CTCCTGCACT CCCCCAAGGT GCTGGTGCTG
GACGAGCCGT TCGAGGCGGT CGACCCCGTG TCGGCGCGCG TGCTGCGCGC CATCATGCGG
CGGTTCGTCG CCGCCGGCGG GTCGATCGTC ATCTCGTCGC ACGTGATGTC GCTCGTCGAG
GACCTGTGCG ACCGCGTCGC GATCATCGCG AAGGGCGAGG TCGTCGCCGC CGGCACGCTC
GACGAGGTGC GCGGCGACGG CTCCCTCGAG GACGTCTTCG TCCGGCTCGT CGGCGAGCGC
AGCATCGGAG AGGAGGAGCT CGCATGGTTG GGATCCTGA
|
|---|
| Protein sequence | MTAFELDALT KDFSGTLAAD AVSVSVPVGS LTGLVGPNGA GKTTSLSMAV GLLRPDSGTA
RVHGIDVWAD PTRAKAMLGV LPDGLALPER LTGAELLRYW GLLRGMAPDV VASRTAELLR
ILELDEAEAK GVLVIEYSTG MRKKIGLATA LLHSPKVLVL DEPFEAVDPV SARVLRAIMR
RFVAAGGSIV ISSHVMSLVE DLCDRVAIIA KGEVVAAGTL DEVRGDGSLE DVFVRLVGER
SIGEEELAWL GS
|
|---|
| |