Gene Bcav_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2687 
Symbol 
ID7861573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp2983050 
End bp2983658 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID643866784 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002882694 
Protein GI229821168 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.782088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.486602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGAC TGGCAGACCA CGACGAGCGC CGGCACCAGA TCACCGACGC CGCACGCAGG 
GTCGTCGCTC GGGGCGGGCT GCCGGCCGCG ACCTTTCAAT CGGTGGCCGC CGAGGCTGGG 
GTCTCCGTGC GCCTCGTGCA GTACTACTTC GGCAGCAAGC GCGAGTTCCT GCTCGCCACT 
CACCGGGCAG TCGTCATGGA CGCAGCGGAA CGCTTCGCCG GCCGGCTCGC GGACCTCGGC 
GAGGGCGCAG CACCCCACGA CGTGGTGCGA GGCGTGCTCA TGGAGCTGCT CCCCACCGAT 
CCGGCCCGCC GCGAGGACGC GATCGTGCTG GAGGCGTTCC ACAACGCGGC GTTGACCGGG 
TCAGAGGCGA GCGCGGGCGA CCTGCTCGGG GCACCGCGCG CCCTCGTCGA CCTGGTGGCG 
GGCCAGGTGC GACGAGCGCG CAGCACGGCG TCCGGGTCGG CAGAGGCGAC GGACGCCGAG 
ACGGACGCGT GGATCGTGGT GCTGGCGGCG AGCGGCCTCA CCCAGGCGAT GCTCATCGAC 
GCCGGCTTCG CGGCGGACGC CGACACCCTC GTCGATCGGA TCCTCAACAG GTTCCTGCCC 
CGGCACTGA
 
Protein sequence
MPRLADHDER RHQITDAARR VVARGGLPAA TFQSVAAEAG VSVRLVQYYF GSKREFLLAT 
HRAVVMDAAE RFAGRLADLG EGAAPHDVVR GVLMELLPTD PARREDAIVL EAFHNAALTG 
SEASAGDLLG APRALVDLVA GQVRRARSTA SGSAEATDAE TDAWIVVLAA SGLTQAMLID 
AGFAADADTL VDRILNRFLP RH