Gene Bcav_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2681 
Symbol 
ID7861567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2977784 
End bp2978482 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID643866778 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_002882688 
Protein GI229821162 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.415823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.241923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCA TGGCGGCTGA CGACGGCGTG GAGTCACCGA CCCGGCGCTG GTGGTTGCGT 
GCTCGTCTCA TCGAGGCGAA CGACGGGATC ATCGCGGCGG CGGGGGTCGT CGAGGGCATC
GCCGGTGCGG GCGGGGGCGA CGAGACGCTG CTCGTGGCCG GGCTCGCGAT CGCGCTCGCC
GGCGGTGCCG CGGCGGGTGG GGCCGCGTAC GCGGAGGCGG CGGTCGAGGA GGACGCCGAG
GACGCGCTGG TGGAGGACGA GCGCCGTCGG CTCGCCGAGG CGCCCGACGA GGAGCTGGCC
GAGCTCACCG CGATCTACGA GCGGAAGGGG CTCTCGCCTC GGCTCGCCCG CGAGGTCGCC
ACGGAGCTCA CGGCGCATGA CGCGCTGGCG GCGCAGCTGG AGGCGGAGCA CGGCCTCGAC
CTCGCGGAGG AGGAGGTGCC CGCGTGGCGG TCCGGATTCG CCGGCGCCCT CGCCTTCGGG
CTCGGGGCGC TGATCCCTCT CGCCGTGATG GAGCTCGCGC CGCCGTCCGC GCGCGTCCCG
ATGACGTTCG TGGTGGTCGT GGTCGCGCTC ACGATCACGG CGACGATCGC GGCACGGACC
GCCGACTCGA GCGTCCCGCG GGCGGTGGCC CGCACCGTCG CGATCGGCGC CGGGACGATG
CTCGCCACCT GGGCTGTCGG AACTCTCATC GGATCGTGA
 
Protein sequence
MRRMAADDGV ESPTRRWWLR ARLIEANDGI IAAAGVVEGI AGAGGGDETL LVAGLAIALA 
GGAAAGGAAY AEAAVEEDAE DALVEDERRR LAEAPDEELA ELTAIYERKG LSPRLAREVA
TELTAHDALA AQLEAEHGLD LAEEEVPAWR SGFAGALAFG LGALIPLAVM ELAPPSARVP
MTFVVVVVAL TITATIAART ADSSVPRAVA RTVAIGAGTM LATWAVGTLI GS