Gene Bcav_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2679 
Symbol 
ID7861564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2976298 
End bp2977062 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content75% 
IMG OID643866775 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_002882686 
Protein GI229821160 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0984354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGAAC CACGCCTCAC GCTCGTGCTC GATTTCGACG GAACCGTCTG CCTCGGCGAC 
GACCCGGTCT ACCTGTACGC CGAGGAGGCG AGCCGGCGCG CCGGCGTCGA CCTCACGGTC
GGCCTCGCCG GCTTCCTCAG CACCGGTGTG CTGAGCGTGG AGGGGGCCGA CGCCGCACCG
TTCGCCGTCG AGGACGGGTA CCAGGCGATC CATGTCCTCG GCGGGCTCGC CGGGCTGGAG
CGCGACGACC TGCGAGCGAG CTACCGGGCG AGCCGCGCCC GCGTGGACGT CGGCGAGGGG
GAGATGCACA CCCCGGACGG GTTCACCGGG TTCCTCGACG AGGTCCGTTC CGCCGGCACC
CGCGTGGTGC TCGTGACCAA CGCGCCGCTG CTCGGGGCGG AACGCTGGCT CGCGGCCCAC
GACGTCGCCC GCCGGCTCGA TGCGATCGTG CCGGACGCCG GGAAGCCGGT CCGCATGCCG
GCCGTGCTCG ACGCGCTGCT GGAGGAGGCC GGCGCGGAGG ACGAGCCCGA GCTCCTGGCG
AGCGTCGGCG ACGTCTACGC CAACGACATC GCTCCGGCCG TCGCACGCGG CGCCCGTGCC
GCGCACATCG ACCGCTTCGC CCGCGTCCCC GGCCCGGCGA CATGGCGCGC ACCCACGTTC
GTCGAGCTGT ACGAGCCGCT GCTCGCATGG GCGACGGCCG GTGGGGCCGA AGTGTTTACC
GCGGCGTCAC CGGAACGGGT GCCGCAGGGC AGCGGGCGGG AGTAG
 
Protein sequence
MPEPRLTLVL DFDGTVCLGD DPVYLYAEEA SRRAGVDLTV GLAGFLSTGV LSVEGADAAP 
FAVEDGYQAI HVLGGLAGLE RDDLRASYRA SRARVDVGEG EMHTPDGFTG FLDEVRSAGT
RVVLVTNAPL LGAERWLAAH DVARRLDAIV PDAGKPVRMP AVLDALLEEA GAEDEPELLA
SVGDVYANDI APAVARGARA AHIDRFARVP GPATWRAPTF VELYEPLLAW ATAGGAEVFT
AASPERVPQG SGRE