Gene Bcav_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2655 
Symbol 
ID7861538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2953089 
End bp2953796 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content73% 
IMG OID643866749 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_002882662 
Protein GI229821136 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.785262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCAGC CTTCCGCCAA GGACCCGATC GTCTGGATCG ACTGCGAGAT GACCGGTCTG 
GACCTCGCCA CCGACGCGCT GGTCGAGGTC GCCGTCATCG TCACCGACTC CGAGCTGCAC
CCGCTCGACG GCGGGATCGA CGTCGTCATC GCTCCCCCGC CCGGGGCGCT GGAGGCGATG
GGCGACGTGG TCCGCGAGAT GCACACGACG TCCGGGCTGC TCGACGAGCT CGCCGGCGGC
GTCGAGCTCG CCGAGGCGCA CGCGCTCGTG CTCGACTACG TGCGGCGCCT CGTCCCCGAC
CCGCGCCGCG CACCCCTGGC CGGCAATTCG GTCGGCACCG ACCGCGGCTT CCTCGAGCGG
GACATGCCGG ACCTCGTGGG GCACCTGCAC TACCGGATCA TCGACGTCTC CTCCATCAAG
GAGCTCGCGC GGCGCTGGTA CCCGCGCGTC TACTTCAACT CCCCGCCGAA GGCGGGTGGG
CACCGCGCGC TGGCCGACAT CGCCGAGAGC ATCGACGAGC TCCGCTACTA CCGCGCGGCC
CTGTTTCCCG GGGAGCCCGG GCCGGACAGC GCGACCGTCA AGAAGGTGGC GGCGCGCGTG
ACGCGGACAC CCACGGCGGC CACTCTGGCC CCGCCGGCCG AGCCCGGCGT GGCGGGGGCG
GACGGCGTCG ACGCCGTCTC TGGCACCGGG CCGGGGCCGC TACACTAG
 
Protein sequence
MSQPSAKDPI VWIDCEMTGL DLATDALVEV AVIVTDSELH PLDGGIDVVI APPPGALEAM 
GDVVREMHTT SGLLDELAGG VELAEAHALV LDYVRRLVPD PRRAPLAGNS VGTDRGFLER
DMPDLVGHLH YRIIDVSSIK ELARRWYPRV YFNSPPKAGG HRALADIAES IDELRYYRAA
LFPGEPGPDS ATVKKVAARV TRTPTAATLA PPAEPGVAGA DGVDAVSGTG PGPLH