Gene Bcav_2638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2638 
Symbol 
ID7861520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2935126 
End bp2935992 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID643866731 
ProductPalmitoyl-CoA hydrolase 
Protein accessionYP_002882645 
Protein GI229821119 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.548364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.433426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG CGTTCGCGGA GGTCCTGCGG GTCCTCACGC TCGAGCGCAC GGGCGACGAC 
GAGTTCGTGG GCGCGTCGCT GCCGCAGGTC AACGAGCGCG TCTACGGCGG CCAGGTGCTG
GCGCAGGCGG TGCTCGCCGC GGGCCGCACG GTCCCCGGCG GCCGCGACGT GCACTCGGTC
CACGGGTACT TCCTGCGGCC CGGTGACATC GACGTGCCGA TCACGTTCGC CGTCGAGCGG
CTGCGCGACG GCGGCTCGTT CTCGGCACGG CGCACGCACG CACTGCAGGA CGGCGTCCCG
ATCCTGTCGC TCATCGCGTC GTTCCAGGAG CGCCAGAGCG GCGTCGAGCA CGAGGAACCC
TCCGGTCTGA CGGTGCCGCC GCCCGAGGAC CTCGCGAGCA ACGGCGACCT GTTCTCCGCC
ATCGACCACC CGATGGCGCG CTTCCTCGCC CGCACGGCCG CGTTCGACAT CCGGCACGTG
GGTCCGCCCC TGTACGTCCA GCCGGACCCC GAGCCGACGA CGCACCAGGC GCTCTGGATG
CGCCCGACCG GGGCGCTCGA GGGCGAGGCC CGCTCCGACC GGCTGCTCAA CGCCGTCGTG
CTGGCCTACG CCTGCGACCA GGTGATGCTC GAGCCGGTGC TCCGCGCGCA CCACCTGGCG
TGGCGGATGC CGGGCATCTC GGTGGCGAGC CTCGACCACG CGATGTGGTG GCACCGGGAC
GTCGACGTCA GCGACTGGCT CCTGTACGTG CAGGATTCCC CCAGCGCACG GGGCGGGCGC
GGCCTCGGCA CGGCGCGGGT CTACACGCGC GACGGCGCCC TGGTCGCGAC GATCGCGCAA
GAAGGCATGG TCCGCGCGCC GCGCTGA
 
Protein sequence
MSDAFAEVLR VLTLERTGDD EFVGASLPQV NERVYGGQVL AQAVLAAGRT VPGGRDVHSV 
HGYFLRPGDI DVPITFAVER LRDGGSFSAR RTHALQDGVP ILSLIASFQE RQSGVEHEEP
SGLTVPPPED LASNGDLFSA IDHPMARFLA RTAAFDIRHV GPPLYVQPDP EPTTHQALWM
RPTGALEGEA RSDRLLNAVV LAYACDQVML EPVLRAHHLA WRMPGISVAS LDHAMWWHRD
VDVSDWLLYV QDSPSARGGR GLGTARVYTR DGALVATIAQ EGMVRAPR