| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2623 |
|---|
| Symbol | |
|---|
| ID | 7860792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2917010 |
|---|
| End bp | 2918956 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643866716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002882630 |
|---|
| Protein GI | 229821104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.722578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCACAC GCAGGCAGCT ACTCCAGGTC GCGGCCGTCG GCGCGGCCGC AGCATCCCTC
CCGCAGGGGC GGGCGCACGC CGCGGGGGGC GAGACCCCGC CGGAGGGAAC GCTCACCGAT
CTCGGCCCGG CCAGCGTGGC GAGCCCGCTC GGCAACGGGG TGTTCGTCGG CGACGTCCTG
TACGCCGGCT CGCGCGGCCT GTCACCGAAC GTGGTCGGCG CGTACGACCT GGTGCAGGAC
GCCGTCACGG CACACATCGA CATCCCCACC GGGATCGGGA TCTGGGCCAT GTGTGCCGTG
GGCACCGACG TCTACGTCGG CACCCACGCC GAGTCGGACC TGTACCGCCT CGACACGCTC
ACCGGGACGG CCGTCAAGGT GGGCGACTAC CCCGACCACT TCATCTGGAC GGCGGCGGCG
GCGCCCGACG GCATCGTCTA CCTGGGGTGC TCCGAGCCCG GACGGGTGTG GGAGTACGAC
CCGGCCACCG GCGTGAGCCG GGACCTCGGC GAGCCGGCGC CGGGCGAGCA GTACGTGCGC
GGCATCGCCG CCGACGAGCG CTACGTCTAC TGCGGCATCG GCTCGAACGC GCACCTGATC
GCCATCGACC GCGCCACGGG TGAACGTCGC GAGCTGCTCC CGGCCGAGCT CGCCGACCGG
GACTGGGTCT CCTGCCTGTC CGTCTCGGAC ACCCACGTGG CGGGCGGGAT GAACTCGCTC
GCCGAGGTCG TCGTCGTGAA CAAGGCCGAC CCGACCGACC ACCTGCTCGT CAAGCTGTCC
GCACCGGGCG AGAAGTACGC CGTCGTGGTC CTGCTGCACG AGGGGTACGT CTACGCCGCG
GGTCGTCCGT CCGGCACGTT CTACCGCGCC AGCCTGGCGA CCGGTGAGGT CGAGGTCCTC
GGCGTCCCGT ACTTCGAGGC GCTGACCCAC CGGCTCCTCG CCCACGAGGG CAAGATCTAC
GGCATCCAGG ACAGCGCCGT CTTCGTCTTC GACCCGGCGA CGGGTGCCCT CGAGTACCGC
AACCTCGTCG ACCGCGGGTT CCGAACGGCT CCCGAGCAGC CGATGTCGGT GCACTCCGAC
GGGCGGCGCG TCTACGTCGG CGGCAAGAAC GGGGCCGACG TCCACGACCT GCGCACGGGC
GACGTCACGC ACCTCGACAT CGCCGGCGAG CCGAAGACGA TGCTCACCGT GGGCGGCACC
ACGTACCTGG GGATCTACAC GCAGGCCGCC CTCTACTCGC ACCGGGCGCG CGACGAGGAC
GCCGTCCTCC TCGCGCGCGC CGGTAACCAG CAGGACCGGC CGCGGGACCT CGCGTACGAC
CCGAGGACCG GCGTGGTGCT CATGGCGACC CAGCCGGAGC CGGGGCACGT CAACGGCGCG
CTCTCCTTCT ACTCGCCGCG GGAGGGCACG TTCGAGACGC TGCGCCCGGT GGTCGAGCGG
CAGACCGTGT ACTCGCTCGC GGCGCGCGCC GGCGTCGCCT ACCTGGGCAC CACCACGCAG
GAGGGCCTGG ACCTGCCACC TGTCACGCCG ACGGCGCGGG TCGCCGCGTT CGACCTGACC
GACCGCACCC TGCTGTGGGA GCTCGAGCCG TTCGCGAACG TGCGCACCAT CACCAGCCTG
AGCCTGGCCG GCCGCTACCT GTACGGGATG GCCAGCAGCG GGGAGGTGTT CGAGGTCGAC
GTGCGCCGGC GGGAGGTGAC GCGCACCGTG CAGGTCGGCG CGAAGGGCAG CGAGCTGTTC
GTCGTCGGCG ACGTCGCCTA CTGCACCGAC GGCGACGCGG TCTACAGGCT CGACCTGCGG
ACCTTCACAG CGACGGCGAT CGTCACCGGG CTCGCTGGCG AGTGGTTCGG GGGCGAGCCC
AAGCTCGCGC TCGACCCGTC CCGTTCGGCG CTGTTCGGCC TCCACAAGCG GAACCTCGTG
CGGATCGACA TCGACCCTCG CGCGTGA
|
|---|
| Protein sequence | MITRRQLLQV AAVGAAAASL PQGRAHAAGG ETPPEGTLTD LGPASVASPL GNGVFVGDVL
YAGSRGLSPN VVGAYDLVQD AVTAHIDIPT GIGIWAMCAV GTDVYVGTHA ESDLYRLDTL
TGTAVKVGDY PDHFIWTAAA APDGIVYLGC SEPGRVWEYD PATGVSRDLG EPAPGEQYVR
GIAADERYVY CGIGSNAHLI AIDRATGERR ELLPAELADR DWVSCLSVSD THVAGGMNSL
AEVVVVNKAD PTDHLLVKLS APGEKYAVVV LLHEGYVYAA GRPSGTFYRA SLATGEVEVL
GVPYFEALTH RLLAHEGKIY GIQDSAVFVF DPATGALEYR NLVDRGFRTA PEQPMSVHSD
GRRVYVGGKN GADVHDLRTG DVTHLDIAGE PKTMLTVGGT TYLGIYTQAA LYSHRARDED
AVLLARAGNQ QDRPRDLAYD PRTGVVLMAT QPEPGHVNGA LSFYSPREGT FETLRPVVER
QTVYSLAARA GVAYLGTTTQ EGLDLPPVTP TARVAAFDLT DRTLLWELEP FANVRTITSL
SLAGRYLYGM ASSGEVFEVD VRRREVTRTV QVGAKGSELF VVGDVAYCTD GDAVYRLDLR
TFTATAIVTG LAGEWFGGEP KLALDPSRSA LFGLHKRNLV RIDIDPRA
|
|---|
| |