| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2618 |
|---|
| Symbol | |
|---|
| ID | 7860787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2911213 |
|---|
| End bp | 2911788 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866711 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002882625 |
|---|
| Protein GI | 229821099 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.186138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGACT CCGAGTTCGA GGAGCTCGTC GTCGTCCTGC ACGCGGCCGT CCATGCGTAC
GCGGCCAGGC GCACCGACCC GCACACGGCC GACGACGTCG CGGCCGAGAC GTTCGCTGCG
GTCTGGCGGC GTCGAGCGGC GGCGCCGTCG GACAGCACCG AGCGTCGGGC GTGGGTGTTC
GGGTTCGCCC GGCACGTGCT GGCTCACGCG CAGCGTGCGA AGGCGCGGCA GCTGAACCTG
GGCGTGCGGA TGCACGCGGC GGTGATGGCC GGGCTGCCGA TCGTCGAACC CGACGTCGCC
GAGCGGGTCG TCGACTCGCA CGAGGCGGCG GGCATCCTGC GGCGCCTGAG CCCACGGGAC
GTCGAGGTCC TCGGGCTGGT GGTCTGGGAC GGGCTGTCGC CCGCCGAGGC CGCGGCCGTC
CTGGGATGCT CCGTGACCGC GCTGACCACC CGGCTCATGC GGGTGCGTCG CCACATCGCC
GCACTGTTGC GCGCTCACGC GTACGACGTC GACCACGACC TGAACGACGA GGACCGCCGC
CTGCTGGGCG GGGCGACCGA AGGGGGCCCG GGATGA
|
|---|
| Protein sequence | MDDSEFEELV VVLHAAVHAY AARRTDPHTA DDVAAETFAA VWRRRAAAPS DSTERRAWVF
GFARHVLAHA QRAKARQLNL GVRMHAAVMA GLPIVEPDVA ERVVDSHEAA GILRRLSPRD
VEVLGLVVWD GLSPAEAAAV LGCSVTALTT RLMRVRRHIA ALLRAHAYDV DHDLNDEDRR
LLGGATEGGP G
|
|---|
| |