Gene Bcav_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2596 
Symbol 
ID7860763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2888248 
End bp2889522 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content67% 
IMG OID643866687 
ProductATP-dependent Clp protease, ATP-binding subunit ClpX 
Protein accessionYP_002882603 
Protein GI229821077 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTG CAGGTGAAGG AGCCGACCTC CTCAAGTGCT CGTTCTGTGG GAAGAGCCAG 
AAGCAGGTCA AGAAGCTGAT CGCAGGGCCA GGGGTCTACA TCTGCGACGA GTGCATCGAC
CTGTGCAACG AGATCATCGA GGAGGAGCTG GCGGAGGCCA CGGAGATCGG CCTCGTGGAC
CTGCCCCGGC CGAAGGAGAT CTTCGCCCAC CTCGAGCAGT ACATCATCGG CCAGGACTCG
GCGAAGAAGT CGCTGTCGGT CGCGGTGTAC AACCACTACA AGCGCATCCA GGCGCGGGAG
AGCGGCACCG GCCTCGGCGA GGACGGCGTC GAGATCGCCA AGTCGAACGT GCTCCTCATC
GGGCCCACCG GCACCGGCAA GACCTACCTG GCGCAGACGC TCGCGAAGAT GCTGAACGTC
CCGTTCGCGA TCGCCGACGC GACGGCGCTG ACCGAGGCCG GGTACGTCGG CGAGGACGTC
GAGAACATCC TCCTCAAGCT CATCCAGGCC GCGGACTTCG ACACGAAGAA GGCCGAGACC
GGGATCATCT ACATCGACGA GGTCGACAAG ATCGCCCGCA AGGCCGAGAA CCCGTCGATC
ACCCGTGACG TCTCCGGGGA GGGCGTCCAG CAGGCGCTCC TCAAGATCAT CGAGGGCACG
CAGGCGTCGG TGCCGCCGCA GGGCGGCCGC AAGCACCCGC ACCAGGAGTT CATCCAGATC
GACACGACGA ACGTGCTGTT CATCGTGGCG GGCGCGTTCG CCGGGCTGGA CGACATCATC
GCGACGCGGT CACGCCGTCG CGGCGTCGGG TTCAACGCGC CCCTGCACGA CGCGGACGAG
GAGGACCTGT TCTCACAGGT CCGGCCGGAG GACCTCCAGA AGTACGGGCT CATCCCGGAG
TTCATCGGCC GGCTGCCCGT GGTCGCGACG GTCACGAAGC TCGACCAGGA AGCCCTCGTG
CGGATCCTCA CCGAGCCGAA GAACGCGCTC GTGCGGCAGT ACCAGCGGAT GTTCGAGATC
GACGGCGTCG AGCTGGAGTT CACGGACGAC GCCATCGAGT CCGTCGCGGA CCAGGCGCTG
CTGCGCGGGA CCGGTGCGCG GGGGTTGCGC GCCATCCTGG AAGAGGTGCT CATGCCCGTC
ATGTTCGACG TGCCCGGTCG TGACGACGTC GAACGGGTCG TGATCACCCG CGAGGTGGTG
CTCGAGAACG TCAACCCGAC GCTGGTGCCC CGCGAGGCAC CGTCGCGGCG GACCCCGCGC
GAGAAGAGCG CGTGA
 
Protein sequence
MARAGEGADL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL AEATEIGLVD 
LPRPKEIFAH LEQYIIGQDS AKKSLSVAVY NHYKRIQARE SGTGLGEDGV EIAKSNVLLI
GPTGTGKTYL AQTLAKMLNV PFAIADATAL TEAGYVGEDV ENILLKLIQA ADFDTKKAET
GIIYIDEVDK IARKAENPSI TRDVSGEGVQ QALLKIIEGT QASVPPQGGR KHPHQEFIQI
DTTNVLFIVA GAFAGLDDII ATRSRRRGVG FNAPLHDADE EDLFSQVRPE DLQKYGLIPE
FIGRLPVVAT VTKLDQEALV RILTEPKNAL VRQYQRMFEI DGVELEFTDD AIESVADQAL
LRGTGARGLR AILEEVLMPV MFDVPGRDDV ERVVITREVV LENVNPTLVP REAPSRRTPR
EKSA