Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2592 |
Symbol | |
ID | 7860759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 2882516 |
End bp | 2883334 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643866683 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002882599 |
Protein GI | 229821073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.204872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCT CGCGCGGTGA GCGCACCGCG AACTACGCGC TCCTGCTGCT GTTCGCGGCG TTCGCCCTCG CCCCGGTGGT GACGGTGGTC GTGACGGCGC TCGGTCCGGC CGGGCCGGAC GGGCCGGGTT CCGTGACGAC GGTCGGCCTG GAGAACCTCG TCCGTGCGTG GGACGACGGC GGCTTCGCCC GGTACCTGCG CACCTCGGTG CTCGTCGCCG TCGTCGTGGT GTCCGTCGCC CTCGTGGCGT CGCTGCTCGC GGGCTACGCG TTCGCGACGA TGCGGTTCTT CGCCCGCGGC GTGCTGTTCT ACGCGATCCT CGTGGGCATC ATGGTCCCGA CCGAGGCGAT CGTGGTCCCG CTGTTCTTCG ACCTGCGGAC GTTCGGCCTC ACGGACACGC TGTGGGCCGT CGCGCTGCCC CAGATCGCCC AGACGATCGC GTTCGGCACG TTCTGGATGC GCACCGCGTT CCGAGCGTCG CCGCCGTCGC TGCTCGAGGC GGCGACCCTC GACGGCGCCG GACCGTGGCG TGCGCTCTGG TCGGTGCTCG TGCCGGTGCA CCGGCCGGCG ACCACGACCC TCGCCGTCCT CGCGTTCCTG TGGACCTGGA ACGAGTTCCT CATCCCGCTC GTCATGAGCC CGAGCGGCGC GTTCCGGACG GCGCCGCTCG CCCTCGCCCT GTTCAAGGGG CAGCACACGC AGGCGACGGC GCTGCTTGCC GCCGGTGCGC TGCTCGTCGC GATACCGGTG CTCGCGCTGT ACGTCGTCGC ACAGCGCCAC GTCATCGCCG GCATGCTCGC CGGGTCGGTC CGCGAGTAG
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Protein sequence | MIVSRGERTA NYALLLLFAA FALAPVVTVV VTALGPAGPD GPGSVTTVGL ENLVRAWDDG GFARYLRTSV LVAVVVVSVA LVASLLAGYA FATMRFFARG VLFYAILVGI MVPTEAIVVP LFFDLRTFGL TDTLWAVALP QIAQTIAFGT FWMRTAFRAS PPSLLEAATL DGAGPWRALW SVLVPVHRPA TTTLAVLAFL WTWNEFLIPL VMSPSGAFRT APLALALFKG QHTQATALLA AGALLVAIPV LALYVVAQRH VIAGMLAGSV RE
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