Gene Bcav_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2592 
Symbol 
ID7860759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2882516 
End bp2883334 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID643866683 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002882599 
Protein GI229821073 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.204872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCT CGCGCGGTGA GCGCACCGCG AACTACGCGC TCCTGCTGCT GTTCGCGGCG 
TTCGCCCTCG CCCCGGTGGT GACGGTGGTC GTGACGGCGC TCGGTCCGGC CGGGCCGGAC
GGGCCGGGTT CCGTGACGAC GGTCGGCCTG GAGAACCTCG TCCGTGCGTG GGACGACGGC
GGCTTCGCCC GGTACCTGCG CACCTCGGTG CTCGTCGCCG TCGTCGTGGT GTCCGTCGCC
CTCGTGGCGT CGCTGCTCGC GGGCTACGCG TTCGCGACGA TGCGGTTCTT CGCCCGCGGC
GTGCTGTTCT ACGCGATCCT CGTGGGCATC ATGGTCCCGA CCGAGGCGAT CGTGGTCCCG
CTGTTCTTCG ACCTGCGGAC GTTCGGCCTC ACGGACACGC TGTGGGCCGT CGCGCTGCCC
CAGATCGCCC AGACGATCGC GTTCGGCACG TTCTGGATGC GCACCGCGTT CCGAGCGTCG
CCGCCGTCGC TGCTCGAGGC GGCGACCCTC GACGGCGCCG GACCGTGGCG TGCGCTCTGG
TCGGTGCTCG TGCCGGTGCA CCGGCCGGCG ACCACGACCC TCGCCGTCCT CGCGTTCCTG
TGGACCTGGA ACGAGTTCCT CATCCCGCTC GTCATGAGCC CGAGCGGCGC GTTCCGGACG
GCGCCGCTCG CCCTCGCCCT GTTCAAGGGG CAGCACACGC AGGCGACGGC GCTGCTTGCC
GCCGGTGCGC TGCTCGTCGC GATACCGGTG CTCGCGCTGT ACGTCGTCGC ACAGCGCCAC
GTCATCGCCG GCATGCTCGC CGGGTCGGTC CGCGAGTAG
 
Protein sequence
MIVSRGERTA NYALLLLFAA FALAPVVTVV VTALGPAGPD GPGSVTTVGL ENLVRAWDDG 
GFARYLRTSV LVAVVVVSVA LVASLLAGYA FATMRFFARG VLFYAILVGI MVPTEAIVVP
LFFDLRTFGL TDTLWAVALP QIAQTIAFGT FWMRTAFRAS PPSLLEAATL DGAGPWRALW
SVLVPVHRPA TTTLAVLAFL WTWNEFLIPL VMSPSGAFRT APLALALFKG QHTQATALLA
AGALLVAIPV LALYVVAQRH VIAGMLAGSV RE