Gene Bcav_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2565 
Symbol 
ID7860732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2851607 
End bp2852194 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content73% 
IMG OID643866656 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002882572 
Protein GI229821046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.908518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0361185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGG GCGAGGCGAC GCGCGGGGCG ATCCTCGACG TCGCCGTGGC CACCGCGTAC 
CGCGTCGGGC TCGGTGGGCT GACGATCGGC GAGCTGGCCC GCACGGCTGA CATGTCCAAG
AGCGGGCTGT ACGCGCACTT CCGGTCGAAA GAGGCCCTCC AGCTCGCCGT TCTCGACGCC
GCTCGGCGCA GGTTCGTGGA CCGCGTGGTG CGCCCCGCGC TCGCCACGCC GCGGGGAGAG
GCGAGGCTGC GCGAGCTGGT CGACCGCTGG CTCGCCGCCG GCCTGTCCCG CGAGCCGGGA
TGCTCGCTGT TCGTGAAGGC GAGCACGGAG CTGGACGAGC AGGAGGGCCC GGTGCGCGAC
GCGCTGACCG CCGACCACCG CGACCTGCTC GACACGATCG CGCAGGTCTT CCGCACGTGC
GTCGCCGAGG GCGACGTGGC CGAGGACGCC GACCCGGACC AGTTCGCGAC CGACCTCGAC
GGCATCATGC TCGCGTTCTA TCACGCGCAC CGGCTCCTGC GGGATCCGGA CGCGGAGCTC
CGGGCGCGGC GCGCGTTCGA GAACCTGCTC GCCGCCGCTC GTCCCTGA
 
Protein sequence
MSKGEATRGA ILDVAVATAY RVGLGGLTIG ELARTADMSK SGLYAHFRSK EALQLAVLDA 
ARRRFVDRVV RPALATPRGE ARLRELVDRW LAAGLSREPG CSLFVKASTE LDEQEGPVRD
ALTADHRDLL DTIAQVFRTC VAEGDVAEDA DPDQFATDLD GIMLAFYHAH RLLRDPDAEL
RARRAFENLL AAARP