Gene Bcav_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2563 
Symbol 
ID7860595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2849815 
End bp2850480 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content79% 
IMG OID643866655 
Productdihydroxyacetone kinase, L subunit 
Protein accessionYP_002882571 
Protein GI229821045 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.389058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0624856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG CGGCCCCGGG CGAGGCGCCC GAGGGGCTCG GCGTCGAGTG GGCGCTCCTC 
TGGATCCGCC TCGCCGGCGC CGACATCGCG GAGAACCGGA GCCGGCTCAG CGAGCTCGAC
CGGGCGATCG GGGACGGCGA CCACGGCGAG AACATGGCGC GCGGGTTCGC GGCGGTGCTC
GCGAAGCTCG ACGCGGAACC CGCACCGGAG ACGGTCGGCG ACGTGCTCAA GGTCGTCGCG
ACCACGCTGA TGTCGACGGT CGGCGGTGCG GCGGGGCCGC TCTACGGCAC GGCGTTCCTG
CGGGCCGCGA AGGTGGCGGC CACGCCGGTG GACGCCGTGG GTGTGCACAC GCTCGTCGAC
GCCGCGCTCG AGGGCATCGT CGCGCGCGGC CGCGCGCAGG TGGGCGACAA GACGATGGTC
GACGCCTGGA CGCCGGCGGC CCGTGCCGCG CAGGAGGCGG CCGACGACGG CGCCGCGCCG
GCCGGCGTGT GGGCGGCCGC GGCGAGCGCC GCGCAGGAGG GCGCCGTCGC GACCGAGCCG
CTCGTCGCGC TCAAGGGCCG GGCGAGCTAC CTCGGGGAAC GCTCGGCGGG CCACCGCGAC
CCGGGTGCGG AGTCCACGGC CCTGCTCCTG GCGGCGGCCG CGCGCGCCGC GCAGGAGGCG
GCGTGA
 
Protein sequence
MSAAAPGEAP EGLGVEWALL WIRLAGADIA ENRSRLSELD RAIGDGDHGE NMARGFAAVL 
AKLDAEPAPE TVGDVLKVVA TTLMSTVGGA AGPLYGTAFL RAAKVAATPV DAVGVHTLVD
AALEGIVARG RAQVGDKTMV DAWTPAARAA QEAADDGAAP AGVWAAAASA AQEGAVATEP
LVALKGRASY LGERSAGHRD PGAESTALLL AAAARAAQEA A