Gene Bcav_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2561 
Symbol 
ID7857853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand- 
Start bp2848426 
End bp2849019 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID643866653 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002882569 
Protein GI229821043 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.212486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0969091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGA CCGAGGAGCC AGGGCTGCGC GCGCGCCAGA AGCGCGAGCG CCGCCGTCAG 
CTCGTCGACG CTGCCCGGCG ACTCGTGCGG GAACGCGGGC TCGACCAGGT CACGGTGGAC 
GACATCTGCG CCGAGGTCGG GATCTCTCCC CGCACGTTCT TCAACTACTT CGAGGTCAAG 
GAGGACGCCG TCCTCGACGC GGACGCGTGG GACGTCACGA ACCCTGCCGT GCAGGAGTTC 
GCCCGCGGCG GCCCCACGGG GGTCCTGTGG GACGACGCCG TCGCCCTCGT CCGCGGCGTG 
TTCAGCGACC CGGACATCCA GAGCGTCACG TCCGTGCTCG AGCTCGCGCA CTCCGACCCC 
CGGCTCCTGG CGCGCCACCT GTACTGGATG GATCGCGGCC ACACCCAGTT CGAGGAGCTC 
GCCGCGCGCC GGGCAGGCCG CGACGCGCCG GACGACACCG ACCGGGCGAT CACCGTCCTC 
GTCATCGCCC TCATCCACCT GACGTTCCGC TCCTGGAAGG ACGCCGACTT CGCCGGCGAT 
CCTGCGACCT ACGTGACCGA CGTCGCCGCG GCGATCCGCG CCGTCGCCGT CTGA
 
Protein sequence
METTEEPGLR ARQKRERRRQ LVDAARRLVR ERGLDQVTVD DICAEVGISP RTFFNYFEVK 
EDAVLDADAW DVTNPAVQEF ARGGPTGVLW DDAVALVRGV FSDPDIQSVT SVLELAHSDP 
RLLARHLYWM DRGHTQFEEL AARRAGRDAP DDTDRAITVL VIALIHLTFR SWKDADFAGD 
PATYVTDVAA AIRAVAV