Gene Bcav_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2556 
Symbol 
ID7857848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2844012 
End bp2844998 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content76% 
IMG OID643866648 
Productbeta-lactamase 
Protein accessionYP_002882564 
Protein GI229821038 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.400267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGGG ACGGCGCGGG CGTGCGCGCT GCACTGCGCG ACGCCGGGTA CGCGCCCGAC 
GACGCCGTCG CGGTCGCCGT GACGCGCCGC GGGCGTCTGG GCGTGCACGC GCAGGGACGC
ACCAGCGCCG GCAGCGCCTT CACCGCGGAC ACGGTGACCT ACGCCGCGTC GCTGGCGAAG
CAGGTGACGG CCGCCGGCGT GGCGCTGCTC GTGCGCGACG GCGTCCTCGA CACCCGCGAC
CGCCTCGCCC GGTGGATCCC GACGCTGCCC GGGTGGGCGG ACTCGGTGCG CCTGGACCAC
CTCCTCCACC ACACCGCAGC ACTTCCCGGC GACGCCGAGC TCGTCGCACG CGTCCCGGAG
CTGCGCACCC GATGGACGAC GCCCGGTGTC CTGGCGGCGC TCGCCGGCGT GCGGGACCTG
GAGCGTGAAC CGGGAGCCGA GCACGCCTAC AACAACGCGG GCTACGTGTG CCTCGCCGAG
GTGGTCGAAC GGGCGAGCGG CGAGCCGTTC ACCACGTTCG CCGCGCGCCG GCTCCTCGAG
CCGACGGGCA TGGCGAGCTC CCGGTTCTGG GCCGGTCCGC GGAAGGAGCC GCCCGGTCTC
GCGCCGTCGG ACAGCCCGTC GTCCGAGCCC GGGGCCACGT CGTGGCTCTC CCTGGGCGAC
GGGGGCCTGT GGACGACGGC GGGCGACCTG GCGCGCTGGA ACGTCGCGCT CCTGCGCGAC
GACCTGGGGA TCGCCCGGAT CGTCGAGCAG ACCGGACGTC TCGACGACGG GACTGCCCTC
CCGGCGGCGT GGGGCTTCTC GGTCCGGGAC CGCGGCGGCG AGCTGGTCCA CACCGCGGGC
GGGAACGTCC CGGGCGTGAC GGGCACCGTT CGACGCGTGC CCGGCCACGA CGTCAGCCTG
ACGGTCCTCA CGCGGACCGA CGGCGTCGAG CGCGTCCTCG CGGCGACCGA GGCCCTCCTG
GACCTCGCCC TGACCGCGGA GCGCTGA
 
Protein sequence
MTWDGAGVRA ALRDAGYAPD DAVAVAVTRR GRLGVHAQGR TSAGSAFTAD TVTYAASLAK 
QVTAAGVALL VRDGVLDTRD RLARWIPTLP GWADSVRLDH LLHHTAALPG DAELVARVPE
LRTRWTTPGV LAALAGVRDL EREPGAEHAY NNAGYVCLAE VVERASGEPF TTFAARRLLE
PTGMASSRFW AGPRKEPPGL APSDSPSSEP GATSWLSLGD GGLWTTAGDL ARWNVALLRD
DLGIARIVEQ TGRLDDGTAL PAAWGFSVRD RGGELVHTAG GNVPGVTGTV RRVPGHDVSL
TVLTRTDGVE RVLAATEALL DLALTAER