Gene Bcav_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2550 
Symbol 
ID7857842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2834514 
End bp2838089 
Gene Length3576 bp 
Protein Length1191 aa 
Translation table11 
GC content76% 
IMG OID643866642 
Productchromosome segregation protein SMC 
Protein accessionYP_002882558 
Protein GI229821032 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.355324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.42272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCTGA GGACGTTGAC GCTGCGAGGA TTCAAGTCCT TCGCGTCGGC GACCACGCTC 
CACCTGGAGC CGGGCATCAC GTGCGTGGTC GGCCCGAACG GCTCCGGCAA GTCGAACGTG
GTCGACGCCC TGGCGTGGGT GATGGGGGAG CAGGGCGCCA AGACGCTGCG CGGCGGCGCG
ATGTCCGACG TCATCTTCGC GGGCACCGCG TCCCGGCCGC CGCTCGGCCG CGCCGAGGTC
TCGCTGACGA TCGACAACGC CGACGGCGCG CTCCCGATCG ACTACGCCGA GGTCACGATC
TCCCGGACGC TCTTCTCCGG TGGCGGCTCC GAGTACGCCA TCAACGGCAC GGCGTGCCGC
CTGCTCGACA TCCAGGACCT GCTCTCGGAC TCCGGCCTCG GCCGCGAGAT GCACGTGATC
GTCGGGCAGG GCCAGCTCGA CGCCGTCCTG CGCGCCACGC CAGAGGAACG CCGCGGCTTC
ATCGAGGAGG CCGCGGGGAT CCTCAAGCAC CGCAAGCGCA AGGACAAGGC GCTGCGCAAG
CTCGAGGCGA TGGCGGCGAA CCTCGCCCGG CTCACCGACC TGACGGCCGA GATCCGGCGG
CAGCTCGGCC CGCTCGCGAA GCAGGCCGAC GTCGCCCGGC GCGCCCGCGT GGTCCAGGCG
GACCTGCGGG ACTCCCGTGC GCGCCTGCTG GCGGACGACC TCGTGCAGCT CACCGCGACG
CTCGAGCAGG AGATCGCCGA CGAGACGGCG CTGCGCACGG CACGCGACGA GGTCGAGGCG
GCGCAGGCCG ACGCGCGCGG CCGGCTCGCC ACGCACGAGT CGCGGGCCGC GGCTGCCGCA
CCCGCCCTGA GCGAGGCGAC GGAGGTCTGG TACCGGCTGT CCGGGCTGCG CGAACGCATG
CGGGGCACCG CCACCCTCGC CGCCGAGCGG TGCCGCCTGC TCGGGACCCC CGAGGCCGAG
CCCGAGGGCG CCGACCCGGA CGACCTCGAG GCCCAGGCCG AGCGCGCCCG CGACGCGGAG
CGCGACCTCG CGCGCGAGGT CGACGCGGCG AAGGAGGGCC TCGCAGCTCG GGTCGAGACG
CGCCAGCTCG CCGAGGCGGA GGCCGCGCGC ACGGAGCACG AGCTCGCGGC CCGGCACCGC
GGCGTCGCCG ACCGGCGCGA GGGTCTCGCC CGCCTCGCCG GGAAGGTCGG AGCGCTGCGC
AGCCGGGCGG AGGCCCAGGC GGCGGAGCTC GAGCGTCTGC ACTCGGCGCT CGCCGACGCC
CAGGGCCGCG AGCGCGAGGC GCGGACCGAG TTCGACGAGC TCGAACGGCA GGCCGCCGGG
GTCGAGGAGG GCGAGGAGGA CCTCGACGCG GCGCACGAGG AGGCGAGCGG AGCCCTCGAG
ACGGCCGGCG CGGAGGTGGC CCGCCTGGTG GAGTCGGGCC GCGAGGCCGA GGGCGACATC
GCGCGCTGGA CGGCACGGCG GGACGCGCTC GAGCTGTCCC TCACGCGCAA GGACGGCACG
GGCGCCCTGC TCGCCGACTC CGAACGCCCG GCCGACGTCC TCGGCGCGCT CGCGGACTTC
CTCACGGTCA CCCCGGGCTA CGAGAACGCC ATCGCGGCGG CACTCGGCCC GCTCGTCGAC
GCCGCTGCCG TCGCCTCGAT CGAGGGTGCC GTCGACGCCG TGCGCCACGT GCGCGACGGG
GAAGCCGGCT GGGCGCACCT CGTCGTCGCC GGCGCGGACC CCGCGCCCGC CGGACCCGCC
CCGGCCGGGA CGCGGTGGGC GCGCGACGTC GTGCGCACCG AGGCGCCCCT GGACGGCACC
GTGCAGCGGC TGCTCGACGG CGTCGTCGTC GTGGACGACC TGGCACAGGC CAGGGCTGTC
GTCGCGGACG CCGACGTCGT CGCCGTCACG TCGGCCGGCG ACGTGCTCGG CCGAGCACGC
GCGGGCGGCG GCAGCGCGTC GGGGCCGAGC GCGCTCGAGC TCCATGCCGC TCGCGACGAG
GCGGTTCGCG AGCTCGCCGA CGCGACGGCG CGCGCGGAAC GCTCCCGGTT CGAGCTGTCC
GCGGCGCGCA CGGCGGAGGA GGGTGCCCGG CGGGCGCACG AGGGCACCCT CGAGGCGCTC
CACGCGTCGG ACGCACGGTT CGCCGCCGTC GCCGAACGGC TCGGCCGGCT CGGCGCGGCC
GTGCGGGCCG CGAGCGCCGA GGCGGAACGG TCGACGGCGG CCATCGGCGC GGCCCAGGCT
GCTCTGGCGG AGCGGGAGGG TGAGCTGTCC GAGCTCGCCG AACGGCTCGA GGTCGCGCAG
CGGGAGCCCG AGGCGGCCGA CGGCGACGTC GAGGCGGCGG CCACGGAGCG GGACGCCGCG
GCGGAGGCCT CCCGCACGGC ACGAGCCGCC GAGACGGACG CCCGCCTCGT GCTGCGGACG
GCTGAGGAGC GGATGCGCGC GATCGGCGGG CGGGCGGCGT CGCTCGAGCG GGCTGCCCGC
GTCGAGCGCG CCGCGCGCGA GCGCGCCGCG GAGAAGATGC GGGTGCGCCG GCGGCAGGCG
CTGGTCGCGC AGGAGGTCCG CGAGGTCGCG GCCGCCGCGC TGTCCGAGCT CGACCGGTCG
CTCGCCAGGG CGACCTCCGA GCGCGAGGTG GCCGAGGCCG CACGCGCCGA GCGGGACGTC
GAGCTCACCC AGGTGCGGGC GGAGCTCGAC GAGCTCGCCC GGCGGCACGC GGAGCTGACC
GACGTCGTGC ACCGCGACGA GGTCGCCCGC GCGGAGCAGC GGCTGCGCAT CACGCAGCTC
GAGACCCGCA GCGTGGAGGA GCTCGGGATC GACCCGGCGG TGCTCGTCGA GGAGTACGGA
CCGGACCGCT CCGTGCCGGA GGCCGCCGCA CCGGGCGCGG CGCCGGACGA CGAGACCGAG
CCCGTCACCC GGCCGTACGT GCGGACGGAG CAGGAGAAGC GGCTGCGTGC GGCGGAGCGC
GCGCTCGCCC TGCTGGGGCG CGTCAACCCG CTGGCGCTCG AGGAGCACGC CGCGCTCGAG
GAGCGGCACG CGTTCCTCAC GCGCCAGCTG GCGGACCTCA AGTCCTCCCG CGCCGACCTG
CTCGAGATTG TCCGCGAGAT CGACGAGCGG GTCGAGGCGG TCTTCACCGA CGCGTTCGCC
GACACGGCGC GCGAGTTCGA GGGCGTGTTC TCCCGACTGT TCCCGGGCGG TGAGGGCCGC
CTCCTGCTGA CGGATCCGGA CGACATGCTG ACGACCGGCA TCGAGGTGGA GGCGCGTCCG
CCGGGGAAGA AGGTCAAGCG CCTGTCGCTG CTCTCCGGTG GCGAGCGGTC GCTCACCGCC
GTCGCCATCC TCGTGGCGAT CTTCAAGGCC AGACCCAGCC CGTTCTACGT GATGGACGAG
GTCGAGGCGG CGCTCGACGA CGTCAACCTC GGCCGCCTCC TCGAGATCTT CACGGAGCTG
CGCGCCAGCT CGCAGCTGAT CGTCGTGACC CACCAGAAGC GGACGATGGA GATCGCCGAC
GCGCTCTACG GGGTCACGAT GCGCGGCGAC GGCGTGACGA CGGTGATCAG CCAGCGCCTC
AAGGAGGACG AGCCCGCCGC CGTCGGCGGG AGGTGA
 
Protein sequence
MHLRTLTLRG FKSFASATTL HLEPGITCVV GPNGSGKSNV VDALAWVMGE QGAKTLRGGA 
MSDVIFAGTA SRPPLGRAEV SLTIDNADGA LPIDYAEVTI SRTLFSGGGS EYAINGTACR
LLDIQDLLSD SGLGREMHVI VGQGQLDAVL RATPEERRGF IEEAAGILKH RKRKDKALRK
LEAMAANLAR LTDLTAEIRR QLGPLAKQAD VARRARVVQA DLRDSRARLL ADDLVQLTAT
LEQEIADETA LRTARDEVEA AQADARGRLA THESRAAAAA PALSEATEVW YRLSGLRERM
RGTATLAAER CRLLGTPEAE PEGADPDDLE AQAERARDAE RDLAREVDAA KEGLAARVET
RQLAEAEAAR TEHELAARHR GVADRREGLA RLAGKVGALR SRAEAQAAEL ERLHSALADA
QGREREARTE FDELERQAAG VEEGEEDLDA AHEEASGALE TAGAEVARLV ESGREAEGDI
ARWTARRDAL ELSLTRKDGT GALLADSERP ADVLGALADF LTVTPGYENA IAAALGPLVD
AAAVASIEGA VDAVRHVRDG EAGWAHLVVA GADPAPAGPA PAGTRWARDV VRTEAPLDGT
VQRLLDGVVV VDDLAQARAV VADADVVAVT SAGDVLGRAR AGGGSASGPS ALELHAARDE
AVRELADATA RAERSRFELS AARTAEEGAR RAHEGTLEAL HASDARFAAV AERLGRLGAA
VRAASAEAER STAAIGAAQA ALAEREGELS ELAERLEVAQ REPEAADGDV EAAATERDAA
AEASRTARAA ETDARLVLRT AEERMRAIGG RAASLERAAR VERAARERAA EKMRVRRRQA
LVAQEVREVA AAALSELDRS LARATSEREV AEAARAERDV ELTQVRAELD ELARRHAELT
DVVHRDEVAR AEQRLRITQL ETRSVEELGI DPAVLVEEYG PDRSVPEAAA PGAAPDDETE
PVTRPYVRTE QEKRLRAAER ALALLGRVNP LALEEHAALE ERHAFLTRQL ADLKSSRADL
LEIVREIDER VEAVFTDAFA DTAREFEGVF SRLFPGGEGR LLLTDPDDML TTGIEVEARP
PGKKVKRLSL LSGGERSLTA VAILVAIFKA RPSPFYVMDE VEAALDDVNL GRLLEIFTEL
RASSQLIVVT HQKRTMEIAD ALYGVTMRGD GVTTVISQRL KEDEPAAVGG R