Gene Bcav_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2548 
Symbol 
ID7857840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2832866 
End bp2834050 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content76% 
IMG OID643866640 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002882556 
Protein GI229821030 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.277216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC AGACCTGGTT CCTGCCCGCC GTGCTCGGCG TCGTCCTCGT CCTCCTCGTC 
GTGGGCGTCG TGCTGCTCGC GCCCCGCCGG CGCCGCCGCG GACAGGCTGG AGCGCCGCCG
CACGTGCCGA CGGCGCAGGC GCCGGAGTCC GGCGTCGGCG AGGAACCGGA GGGCGCGCCC
GAGGGTGGGC GCCCCGGCCT GGTCGACGTG CCGCTCCCGG AGACGGCGGC GCCGTCCGTC
GAGGGGCCGG AGCCGGTCGC CTCTCGTCTG GTGCGCCTGC GTGACCGCCT CGCCCGGTCG
GGGTCGTTCG GGCAGGCGCT GCTCGGCGTC CTCGCCCGGG ACCACATCGG CGAGGGCGAC
TGGGAGGAGC TCGAGGACAC CCTGCTGGCG GCCGACCTCG GGGTCGGGCC GACGACCGAG
CTCATGGAGT CCCTCCGCAC CCGGGTGCGC GTCCTCGGCA CCCGCGATGC GGACTCCGTG
CGCGCCCTGC TGCGCGAGCT CCTCCTCGCG CAGGTGGACC CGGCGATGGA CCGGGCGCTG
GCCGACTCGC CGAGCCTCGG GGCGGACGAC GAGCTGCACC CGGCGACGGT TCTCGTCGTC
GGTGTCAACG GCACCGGCAA GACGACGACG GTGGGGAAGC TGGCGCGCCT GCTCGTGGCG
TCCGACCGGG ACGTCGTGCT CGGCGCCGCC GACACGTTCC GCGCGGCCGC GGCCGACCAG
CTCGCGACCT GGGGGTCCCG CGTGGGGGTG CCGGTCATCC GGGCCGACCG GTACGGCGCC
GACCCGGCGA GCGTCGCGTT CGAGGCGGTG CGCGCCGCGG ACGAGGCGGG CGCCGACGTC
GTCATCGTCG ACACCGCCGG GCGGCTGCAG AACAAGGCGG GGCTCATGGA CGAGCTCGGC
AAGATCGCAC GTGTGGCGTC GCGGCGCGCG CCGATCGCCG AGACGCTGCT CGTCCTCGAC
GCGACCACCG GGCAGAACGG GCTGCGTCAG GCGCGGGTGT TCGCGGAGGT CGTCCCGCTG
ACCGGCATCG TCCTGACGAA GCTGGACGGC AGCGCGAAGG GCGGCATCGT CGTCGCCGTG
CAGCGCGAGC TCGGGGTGCC GGTGAAGTTC GTCGGGCTCG GCGAGGGTCC CGACGACCTC
GCGCCGTTCG AGCCCGACGC GTTCGTCGAC GCCCTGCTCG CCTGA
 
Protein sequence
MTDQTWFLPA VLGVVLVLLV VGVVLLAPRR RRRGQAGAPP HVPTAQAPES GVGEEPEGAP 
EGGRPGLVDV PLPETAAPSV EGPEPVASRL VRLRDRLARS GSFGQALLGV LARDHIGEGD
WEELEDTLLA ADLGVGPTTE LMESLRTRVR VLGTRDADSV RALLRELLLA QVDPAMDRAL
ADSPSLGADD ELHPATVLVV GVNGTGKTTT VGKLARLLVA SDRDVVLGAA DTFRAAAADQ
LATWGSRVGV PVIRADRYGA DPASVAFEAV RAADEAGADV VIVDTAGRLQ NKAGLMDELG
KIARVASRRA PIAETLLVLD ATTGQNGLRQ ARVFAEVVPL TGIVLTKLDG SAKGGIVVAV
QRELGVPVKF VGLGEGPDDL APFEPDAFVD ALLA