Gene Bcav_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2539 
Symbol 
ID7857831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2825492 
End bp2825728 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content73% 
IMG OID643866632 
Producthypothetical protein 
Protein accessionYP_002882548 
Protein GI229821022 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.160005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.11735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCG ACGCGCTCGA GCACCTGGTG CGCGGGATCG TCGACAACCC GGACGACGTC 
CAGGTCTCCT CGCGCACGCT GCGACGCGGT GACCTGCTCG AGGTCCGTGT CCACGCCGAC
GACCTCGGGC GCGTGATCGG CCGTTCCGGT CGCACCGCCC GTGCCTTGCG CACCGTGGTC
GGCGCGCTGG CCACCCAGCC CGTGCGGATC GACGTCGTCG ACTCCCCGCG GCGCTGA
 
Protein sequence
MLADALEHLV RGIVDNPDDV QVSSRTLRRG DLLEVRVHAD DLGRVIGRSG RTARALRTVV 
GALATQPVRI DVVDSPRR