Gene Bcav_2491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2491 
Symbol 
ID7862025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2784677 
End bp2785717 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content73% 
IMG OID643866587 
ProductNusA antitermination factor 
Protein accessionYP_002882503 
Protein GI229820977 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG ACATGAGCGC GCTGCGGGCG CTGGAACGCG AACGGGAGAT CAGCCTCGAC 
GTCCTCGTGG GTGCCATCGA GCAGGCGCTG CTGTCCGCGT ACGAGCGGAC GCCGGGGGCG
TACCCGGAGG CCAGGGTGCA CCTCGACCGC CAGTCGGGGC ACGTGACGGT GCTCGCCACC
GAGGTCGTCG GCGAGGGCGA CGAGGAGGTC CGGCGCGAGT TCGACCACAC GCCGGAGGGC
TTCGGCCGGA TCGCGACGTC GACGGCACGG CAGGTGATCA TCCAGCGCCT GCGGGACGCG
GAGGACGACC AGGTGCTCGG CACGTTCCGC GGCCGGGAGG GCGAGCTCAT CGCCGGCGTC
GTTCAGCAGG GCGGGCGGGT CGGGGCGGTG CTCGTCGACG TGGGCGGTGT CGAGGCCGTC
CTGCCCCCGC ACGAGCAGGT GCCGGGCGAG AGCTATCCGC ACGGGGAGCG CATCCGGGCG
TACGTGCTCG ACGTGAGCCG CGGCCTCAAG GGCCCGTCGA TCACGTTGTC GCGGACGCAC
CCGAACTTCG TCCGGCGGAT GTTCGCGCTC GAGGTGCCCG AGGTCGCCGA CGGCAGCGTC
GAGATCGCCG CACTGGCACG TGAGGCGGGG CACCGCACCA AGATGGCCGT CCGCTCGCTC
GTCCCGGGGG TCGGGGCCAA GGGAGCCTGC ATCGGGCCGA TGGGTCAGCG GGTGCGCGCC
GTCATGGCCG AGCTGCGCGG CGAGAAGATC GACATCGTCG ACTTCAGCGA GGATCCCGCG
CGGTTCGTCG CGGCGGCACT CTCGCCGGCG CGCGTGAGCA GCGTCCAGAT CGTCGACGCC
GAGGCCCGGT CCGCCCGCGT GATCGTCCCC GACTACCAGC TGTCGCTGGC GATCGGCAAG
GAGGGCCAGA ACGCCCGCCT CGCCGCGCGG CTGACGGGGT GGCGGATCGA CATCAGGCCG
GACACCCAGC CAGCGGACGA CGCGGCGTCC GAGGACGCGA CGCCGTCGGG CGATGCAGGC
GATCCGTCCG GCGAGGGGTA G
 
Protein sequence
MDIDMSALRA LEREREISLD VLVGAIEQAL LSAYERTPGA YPEARVHLDR QSGHVTVLAT 
EVVGEGDEEV RREFDHTPEG FGRIATSTAR QVIIQRLRDA EDDQVLGTFR GREGELIAGV
VQQGGRVGAV LVDVGGVEAV LPPHEQVPGE SYPHGERIRA YVLDVSRGLK GPSITLSRTH
PNFVRRMFAL EVPEVADGSV EIAALAREAG HRTKMAVRSL VPGVGAKGAC IGPMGQRVRA
VMAELRGEKI DIVDFSEDPA RFVAAALSPA RVSSVQIVDA EARSARVIVP DYQLSLAIGK
EGQNARLAAR LTGWRIDIRP DTQPADDAAS EDATPSGDAG DPSGEG