| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2478 |
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| Symbol | |
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| ID | 7862012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2770684 |
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| End bp | 2772918 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643866574 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002882490 |
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| Protein GI | 229820964 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0963383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.320365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGTC CCGAGATCCA GTTCGCCGAA GCCACGATCG ACAACGGTCG CTTCGGCACC
CGCACCGTCC GGTTCGAGAC CGGCCGCCTC GCCAAGCAGG CCGCCGGCGC CGTGCTCGCC
ACGCTCGACG AGGACACCGT CGTGCTCTCG ACGACGGCCG CCGGCAAGCA CCCGAAGGAG
CAGTTCGACT TCTTCCCGCT GACCGTCGAC GTCGAGGAGC GCCAGTACGC CGCCGGCAAG
ATCCCCGGCT CGTTCTTCCG CCGCGAGGGC CGCCCCTCGA CCGAGGCGAT CCTCGCCTGC
CGGCTCATCG ACCGGCCGCT GCGCCCCCTG TTCGTCAAGG GTCTGCGCAA CGAGGTCCAG
GTCGTCGAGA CCATCCTCGC CATCCACCCG GACGACTCCT ACGACGTCCT CGCGATCAAC
GCGGCGTCGG CGTCGACGCA GATCTCCGGC CTGCCGTTCT CCGGCCCGGT CGGCGGCGTC
CGCGTCGCCC TGATCGACGG CACCTGGGTC GGTTTCCCGC GCTACAGCGA GAAGGAGCGC
GCCGTCTTCG ACATGGTCGT CGCCGGCCGT GTGGTGGGCG ACGACGTCGC GATCACGATG
GTCGAGGCCG AGGCCACCGA CAACGCCTGG GAGCTCATCA AGGGCGAGGG CGCCGGCGCG
CCGACCGAAG AGGTCGTGGC CGAGGGCCTC GAGGCCGCGA AGCCCTTCAT CCGCGCGCTG
TGCGAGGCGC AGGCCGCTCT CGCCTCGCGT GCGGCGAAGG AGGTCCAGGT CTTCCCGGTC
TTCCCCGAGT ACGAGCCCGA CGCGTACGAC GCCGTCGAGC AGCAGGTGGC CGACCACCTC
GACGCCGCCC TCCGTATCGC CGACAAGCAG GAGCGCGAGT CCCGCCTCGA CGAGATCAAG
GACGCCGCCG TCGGCGCCCT CCAGGCCGGG TTCGACGGCC GGGAGAAGGA GCTGTCGGCC
GCCTACCGCG CGCTGACCAA GAAGTTCATC CGGCGTCACA TCCTCACGGA CAGCTTCCGC
ATCGACGGCC GCGGCCTCAA GGACATCCGT CCCCTGACCG CCGAGGTCGA GGTGCTCCCG
CGCGTGCACG GGTCGGCTCT GTTCGAGCGC GGCGAGACGC AGATCCTCGG CGTCACGACG
CTCAACATGC TCAAGATGGA GCAGCAGCTC GACACGCTCT CGCCCGTCTC GCGCAAGCGG
TACATGCACA ACTACAACTT CCCGCCCTAC TCCACCGGTG AGACCGGCCG GGTCGGCAGC
CCGAAGCGGC GCGAGATCGG TCACGGTGCG CTCGCCGAGC GTGCGCTCGT GCCGGTGCTC
CCGGCCCGCG ACGAGTTCCC GTACGCGATC CGCCAGGTGT CCGAGGCGCT GAGCTCCAAC
GGCTCGACGT CGATGGGCTC GGTCTGCGCC TCGACGCTGT CGATGCTCAA CGCCGGCGTG
CCGCTGCGCG CCCCGGTCGC GGGCATCGCG ATGGGTCTCG TGTCCGACGA GGTGGACGGC
GAGACGCGCT ACGCGACGCT CACCGACATC CTCGGCGCCG AGGACGCCTT CGGCGACATG
GACTTCAAGG TCGCCGGAAC GCGCGAGTTC GTGACGGCCA TCCAGCTCGA CACGAAGCTC
GACGGCATCC CGGCCTCCGT GCTCGCGGGC GCGCTGTCCC AGGCTCGCGA GGCCCGGCTG
CACATCCTCG ACGTCATGGC CGAGGCCATC GACACGCCGG ACGAGATGGC CGCGACGGCG
CCCCGCGTCA TCACCGTCCA GGTGCCCGTC GACAAGATCG GCGAGGTCAT CGGCCCGAAG
GGCAAGATGA TCAACCAGAT CCAGGACGAC ACGGGCGCCG ACATCTCCAT CGAGGACGAC
GGCACGGTGT TCATCGGCGC GACCGACGGC CCGTCGGCCG AGGCGGCGCG GCAGGCGATC
AACGCGATCG CCAACCCGCA CATGCCGGAG GTCGGGGAGC GCTTCGTCGG GACCGTCGTG
AAGACGACGT CGTTCGGCGC GTTCGTCTCG CTCACCCCGG GCAAGGACGG CCTCCTGCAC
ATCTCGCAGA TCCGTCGCCT CGTGGGCGGC AAGCGCGTGG AGAACGTCGA GGACGTCCTC
GGTGTCGGTC AGAAGGTCCA GGTGGAGATC GCCGAGATCG ACCCGCGCGG CAAGCTGTCG
CTGCACGCCG TCGTCGAGGA GACGCCGGCC GACGACGCTC CCGCCGAGGC GTCCACGGCC
ACCGCCGACG CCTGA
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| Protein sequence | MEGPEIQFAE ATIDNGRFGT RTVRFETGRL AKQAAGAVLA TLDEDTVVLS TTAAGKHPKE
QFDFFPLTVD VEERQYAAGK IPGSFFRREG RPSTEAILAC RLIDRPLRPL FVKGLRNEVQ
VVETILAIHP DDSYDVLAIN AASASTQISG LPFSGPVGGV RVALIDGTWV GFPRYSEKER
AVFDMVVAGR VVGDDVAITM VEAEATDNAW ELIKGEGAGA PTEEVVAEGL EAAKPFIRAL
CEAQAALASR AAKEVQVFPV FPEYEPDAYD AVEQQVADHL DAALRIADKQ ERESRLDEIK
DAAVGALQAG FDGREKELSA AYRALTKKFI RRHILTDSFR IDGRGLKDIR PLTAEVEVLP
RVHGSALFER GETQILGVTT LNMLKMEQQL DTLSPVSRKR YMHNYNFPPY STGETGRVGS
PKRREIGHGA LAERALVPVL PARDEFPYAI RQVSEALSSN GSTSMGSVCA STLSMLNAGV
PLRAPVAGIA MGLVSDEVDG ETRYATLTDI LGAEDAFGDM DFKVAGTREF VTAIQLDTKL
DGIPASVLAG ALSQAREARL HILDVMAEAI DTPDEMAATA PRVITVQVPV DKIGEVIGPK
GKMINQIQDD TGADISIEDD GTVFIGATDG PSAEAARQAI NAIANPHMPE VGERFVGTVV
KTTSFGAFVS LTPGKDGLLH ISQIRRLVGG KRVENVEDVL GVGQKVQVEI AEIDPRGKLS
LHAVVEETPA DDAPAEASTA TADA
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