Gene Bcav_2476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2476 
Symbol 
ID7862010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2768320 
End bp2769207 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID643866572 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002882488 
Protein GI229820962 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.985162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.348723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGACC CGACGCACCT GCGGACGTTC CTCGCCGTCG CGCGCACCTT GAGCTTCACC 
CAGGCCGCGG CGCAGCTCGG GATCAGTCAG CCGAGCGTCA GCCAGCACGT CCGCCGGCTC
GAGGAGGCGG CCGGTCGGCA GCTCCTCGTG CGCGACACAC GCGCCGTCTC CCTCACGGAC
AACGGCGAGG CGATGGCGGG CTTCGCCCGG TCGATCCTCG CCGCGCACGA CGAGGCCGCG
AGCTACTTCA CCGGCACCGC GATGCGCGGA CGCCTGAGGT TCGGCGCCGC CGACGACCTG
GCCATCGCCC AGCTGCCCGG CGTGCTGCGC ACGTTCCGGC AGCGGCACCC GCAGATCAAC
CTCGAGCTGA CCGTCACGCA GACGGCGGCG CTGCAGCGCA GGCTTGCCGC GAACCAGCTC
GACCTCGTGT TCGTCAAGGA GCCGCCGGGC GAGACGTCCG GCCGCGTCGT GCGTCGGGAC
CGCCTCGTCT GGATCGGGCT CCCGGGCACC CGGCTGCCCG ACGACGCTCC CCTCCCCCTC
ATCACGTACG CGGCGCCGTC GCTCAGCAAG ACCACGGCGG TGCGTGCGCT CGCCGAGGCC
GGACGGACCT GGCGCATCAC GTGCAAGACG CTCGAGGTCA ACGGCGTGCT GGCGGCCGTT
CGCGCGGGAA TCGGGATCGC CGTCTACCCG GCGAGCCTCG TTCCCGACGA CGTCCAGGTG
CTCCCCGGGA CGCTCGGCCT GCCGGAGCTG GGCGACATCG ACATCACGCT CGTCGCGAAC
CCCCGCTCCC CGAAAGAGCC GATCGAGGCG CTCACGGCGG CGATCCTGCG CCAGCCGTTC
CCGAGCACGA CGGCGGCGCC GAGCGACGAC GACGTCGCAG CCCCCTGA
 
Protein sequence
MFDPTHLRTF LAVARTLSFT QAAAQLGISQ PSVSQHVRRL EEAAGRQLLV RDTRAVSLTD 
NGEAMAGFAR SILAAHDEAA SYFTGTAMRG RLRFGAADDL AIAQLPGVLR TFRQRHPQIN
LELTVTQTAA LQRRLAANQL DLVFVKEPPG ETSGRVVRRD RLVWIGLPGT RLPDDAPLPL
ITYAAPSLSK TTAVRALAEA GRTWRITCKT LEVNGVLAAV RAGIGIAVYP ASLVPDDVQV
LPGTLGLPEL GDIDITLVAN PRSPKEPIEA LTAAILRQPF PSTTAAPSDD DVAAP