| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2472 |
|---|
| Symbol | |
|---|
| ID | 7862006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2763873 |
|---|
| End bp | 2764616 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643866568 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_002882484 |
|---|
| Protein GI | 229820958 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.448881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.609009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGATCA GGGTGGCGGT CCTCGGGGCC GCGGGACGCA TGGGGAGCAC GACGGCGCAA
GCGGTGCGTG ACGCCGAGGG GCTGGAGCTC GTGGCCGAGG TGGACGCCGG CGACGACGTC
GCGGCGCTCG CCGGACGCGC GGACGTCGCC GTCGACTTCA CCCTCCCGGA CGTCACCGAG
GCCAACGTGC ACGCGCTGCT CGACGCCGGG ATCCACGCCG TCGTCGGCAC CACGGGATGG
GACGACGACG CGCTCGGCCG GGTGAGTGAC CACGTCGGTC GCACGGCAGG GCTCGGCGTG
CTGGTGGCGC CCAACTTCTC TCTCTCGGCG GTGCTGGCGA TGCGGTTCGC CGCGCAGGCG
GCGCCGTACT TCGCCTCGGC CGAGGTCGTG GAGCTGCACC ACCCGCGCAA GGTCGACGCG
CCGTCGGGCA CCGCCGTGCA CACCGCGCGC GGGATCGCGG ACGCGCGAGG CGCTGCCGGC
TCGCCCCCCA TGCCCGACGC GACCGAGACG GCGCTGCCGG GCGCGCGGGG CGCCGTCGTC
GACGGCGTGC GTGTGCACGC CCTGCGGCTC GAGGGCCTCG TGGCCCACGA GGAGATCCTG
TTGAGCAACC CCGGCGAGCT CATGACGATC CGCACCGACA CGTTCGACCG GGCGAGCTTT
ATGCCCGGCG TCCTGCTGGC CGTGCGGGAG ATCGCTGACC ACCCGGGGCT GACCGTCGGC
CTCGACGCGT ACCTCGACCT GTGA
|
|---|
| Protein sequence | MTIRVAVLGA AGRMGSTTAQ AVRDAEGLEL VAEVDAGDDV AALAGRADVA VDFTLPDVTE
ANVHALLDAG IHAVVGTTGW DDDALGRVSD HVGRTAGLGV LVAPNFSLSA VLAMRFAAQA
APYFASAEVV ELHHPRKVDA PSGTAVHTAR GIADARGAAG SPPMPDATET ALPGARGAVV
DGVRVHALRL EGLVAHEEIL LSNPGELMTI RTDTFDRASF MPGVLLAVRE IADHPGLTVG
LDAYLDL
|
|---|
| |