Gene Bcav_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2470 
Symbol 
ID7862004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand+ 
Start bp2762736 
End bp2763410 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID643866566 
Producthypothetical protein 
Protein accessionYP_002882482 
Protein GI229820956 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.433224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.796254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCA CGACCCCGCG CCCTGGCGCG CCCTCTCGCC AAGGCGCGGC GACGCGCTCC 
TTGAGCTACC TCATCTTCGC CTCGCGGTGG CTGCAGATGC CGCTGTACCT GGGGCTCATC 
GCTGCCCAGG TGATCTACGT CTGGCAGTTC CTCAAGGAGC TGTGGCACCT CGTCGACTTC 
GCGTTCTTCG ACCACGCCCC GGCGGGCATG GAGGCGTTCA CGAGCGAGGC CACGACGATG 
CTCATCGTGC TGGGGCTCGT CGACGTCGTG ATGATCTCGA ACCTGCTCAT CATGGTGATC 
ATCGGCGGCT ACGAGACGTT CGTCTCCCGC ATGCGGCTCG ACGGGCACCC CGACCAGCCG 
GAATGGTTGA GCCACGTCAA CGCCAACGTG CTCAAGACGA AGCTCGCGAT GTCGATCATC 
GGCATCTCAT CGATCCACCT GCTGCGCACG TTCATCTCGT CGGGCGTCAT GGACGAGGAG 
GGACAGCGAC AGATCACCGG CGAGGACATG ATGTGGCAGA CGATCATCCA CCTCGCGTTC 
GTGCTCTCCG CCGTCGCGCT CGCCCTCATC GACCGCATGT CGTTGACGGC GAAGCAGCGC 
GAGGCGAACG CGGAGCGCGG CGACGAGGGC ACGCACTACA CGGTTGGCGA CGCCGCCAGC 
GAGACCTCCC GCTGA
 
Protein sequence
MTATTPRPGA PSRQGAATRS LSYLIFASRW LQMPLYLGLI AAQVIYVWQF LKELWHLVDF 
AFFDHAPAGM EAFTSEATTM LIVLGLVDVV MISNLLIMVI IGGYETFVSR MRLDGHPDQP 
EWLSHVNANV LKTKLAMSII GISSIHLLRT FISSGVMDEE GQRQITGEDM MWQTIIHLAF 
VLSAVALALI DRMSLTAKQR EANAERGDEG THYTVGDAAS ETSR