| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2442 |
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| Symbol | |
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| ID | 7861976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2731878 |
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| End bp | 2733527 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643866538 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_002882454 |
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| Protein GI | 229820928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.26941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.523628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCCTCG GCCGCCTAGC GCAGGCGGTC GGGGCCTTGC GGAGGCGGAT CGTAGACTGG
ACGACCGTGA CCACGACCGT TCCCGCACCT CCCACCACCC ACGCGAGCGC CGACGCTGCG
CGCGAGGGCG AGTCGTCGGC TGCGGGGCGC TCCTACATGA TCCGCACGCT CGGGTGTCAG
ATGAACGTCC ACGACTCCGA GCGGATGGCC GGCATGCTCG AGGCGGCCGG CCTCGTGCGG
GCGGCCGGCG ACGGGACCAA CCTGCTGCAG GATGCCGCGG AGGCCGACGT CGTCGTCATC
AACACGTGCG CCGTGCGCGA GAACGCGGCC ACCCGGCTGT ACGGCAACCT CGGTCAGCTC
GCGTCGCTCA AGCGTGAACG GCCGGGCCTG CAGATCGCCG TCGGCGGCTG CCTGGCGCAG
TCGGAGCGCA CGAAGATCGT CGAGAAGGCG CCGTGGGTCG ACGTCGTCTT CGGCACGCAC
AACCTCGATG CCCTGCCCGT GCTGCTCGAG CGCGCGCGGC ACAACGCCGA GGCGCAGGTC
GAGATCGCCG AGTCTCTCCA GGTGTTCCCG TCGACTCTCC CCACGAAGCG GGAGTCCGCG
TTCGCGGCGT GGGTCTCGGT CTCCGTCGGG TGCAACAACA CGTGCACGTT CTGCATCGTG
CCGCACCTGC GGGGCAAGGA GCGCGACCGG CGGCCGGGCG AGGTCCTCGC GGAGGTCGCC
GCCGTGGTCG ACGCCGGCGC GATCGAGGTG ACGCTGCTGG GCCAGAACGT CAACAGCTAC
GGCGTGTCGT TCGGCGACCG CGGCGCGTTC GCGAAGCTGC TGCGCGCGTG CGGCGAGATC
GAGGGTCTGG AGCGGGTCCG CTTCACGAGC CCCCACCCAG CGGCGTTCAC CGACGACGTC
ATCGACGCCA TGGCGAGCAC GCCGAACGTC ATGCCGCAGC TGCACATGCC GCTGCAGTCG
GGGTCGGACC GCATTCTGCG CGCCATGCGC CGCTCCTACC GCAGCGAGAA GTTCCTCGGG
ATCCTCGACC GCGTGCGCGC TCGGATCCCC GACGCCGCGA TCACCACCGA CATCATCGTC
GGCTTCCCGG GCGAGACCGA GGAGGACTTC GCCGCGACGC TCGACGTCGT GGCGGCCTCG
CGATTCTCGT CGGCGTTCAC GTTCCAGTAC TCGCCCCGCC CCGGCACGTC CGCCGCGACG
CTGCCCGACC AGGTGCCCGC CGACGTCGTC ACCGAGCGCT ACGCGCGCCT CGTCGCCCTC
CAGGAGCGCA TCAGCGCCGA GGAGAACGCC GCGCTGGTCG GCCGCGAGGT CGAGGTGCTG
ATCTCCGCGG GCGAGGGCCG CAAGGACGGC GCGACGTCGC GCCTCACCGG GCGCGCCCGC
GACAACCGGC TCGTCCACGT CGCCCTGCCG GCATCGATGA CGACGGCGGA GCGTCCGCGG
CCGGGCGACG TCGTCGTCAC GCGCGTGACG CACGGGGCGC CGCACCACCT CGTCGCGGAC
GCCGCGCTCG AGGGCGGCGC GCTGACGGTC CGGCGGACAC GGGCGGGAGA CGCGCACGCG
GGGCGCGAGG AAGCCGCTGC CTGCGGCACG TCCGGCCCGA CGGCGTCCGC TCCGGTCGCG
CTCGGCCTGC CCACCCTGCG GCGCGGCTGA
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| Protein sequence | MLLGRLAQAV GALRRRIVDW TTVTTTVPAP PTTHASADAA REGESSAAGR SYMIRTLGCQ
MNVHDSERMA GMLEAAGLVR AAGDGTNLLQ DAAEADVVVI NTCAVRENAA TRLYGNLGQL
ASLKRERPGL QIAVGGCLAQ SERTKIVEKA PWVDVVFGTH NLDALPVLLE RARHNAEAQV
EIAESLQVFP STLPTKRESA FAAWVSVSVG CNNTCTFCIV PHLRGKERDR RPGEVLAEVA
AVVDAGAIEV TLLGQNVNSY GVSFGDRGAF AKLLRACGEI EGLERVRFTS PHPAAFTDDV
IDAMASTPNV MPQLHMPLQS GSDRILRAMR RSYRSEKFLG ILDRVRARIP DAAITTDIIV
GFPGETEEDF AATLDVVAAS RFSSAFTFQY SPRPGTSAAT LPDQVPADVV TERYARLVAL
QERISAEENA ALVGREVEVL ISAGEGRKDG ATSRLTGRAR DNRLVHVALP ASMTTAERPR
PGDVVVTRVT HGAPHHLVAD AALEGGALTV RRTRAGDAHA GREEAAACGT SGPTASAPVA
LGLPTLRRG
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