Gene Bcav_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2433 
Symbol 
ID7861967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2722910 
End bp2723569 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content71% 
IMG OID643866529 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_002882445 
Protein GI229820919 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.342507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.324912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCTG AGACGAGGGC CGACGGCGCG AAGCCGCTCT CGGCGCGGCA GCGACGCGTG 
CTCGAGACGA TCCGCGCGAG CGTCGAGGAG CGGGGCTACC CGCCGAGCAT GCGGGAGATC
GGCGAGGCCG TGGGCCTCAA CAGCCCGTCG AGCGTCATGC ACCAGCTGAC CGTGCTCGAG
CGGAAGGGGT ACCTGCGCCG CGATCCGCGC CGTCCGCGGG CCATGGAGAT CGTCAGCCCG
GACGACCAGG CACGCGAGGA ACGGCCCTAC GACGTGCCCA CGACGCCGCC TTCGTACGTC
CCGCTCGTCG GCCGGATCGC CGCCGGCGGG CCGATCCTCG CGGAGCAGGT CGTCGAGGAC
GTGTTCCCGC TCCCCCGCCA GCTCGTCGGC GACGGGGACC TGTTCCTGCT CAAGGTGGTC
GGCGACTCGA TGATCGAGGC AGCGATCTGC GACGGCGACT GGGTGGTCGT CCGTCAGCAG
CCCGTCGCCG AGAACGGCGA GATCGTCGCG GCGATGATCG ACGGTGAGGC GACCGTCAAG
ACGCTGAAGC AGTCCGCCGA CGAGGTGTGG CTGCTCCCGG CCAATGCGAG CTACGCGCCG
ATCCCGGGGA ACGACGCACA GATCCTCGGC CGCGTCGTGA GCGTGCTGCG CAGCGTCTGA
 
Protein sequence
MNPETRADGA KPLSARQRRV LETIRASVEE RGYPPSMREI GEAVGLNSPS SVMHQLTVLE 
RKGYLRRDPR RPRAMEIVSP DDQAREERPY DVPTTPPSYV PLVGRIAAGG PILAEQVVED
VFPLPRQLVG DGDLFLLKVV GDSMIEAAIC DGDWVVVRQQ PVAENGEIVA AMIDGEATVK
TLKQSADEVW LLPANASYAP IPGNDAQILG RVVSVLRSV