| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2425 |
|---|
| Symbol | |
|---|
| ID | 7861959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 2715321 |
|---|
| End bp | 2716244 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866521 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002882437 |
|---|
| Protein GI | 229820911 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.503783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.136801 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCC GCCGGTCCCG CCAGGCCCCC GCTCTTCGAC CCGACGCACT GCCGAGCGGC
GAGACCGGGA TCGACACCGG CACCGTCGAG CTCGAGCGGG ACCCCGACCG CCCGAACGGC
GTCATGGTCT ACGTCAACGG CGTCGAGTCG TCCTATGTCG ACCTCGCCGA CGCCGAGCAC
CTCGAGTTCG AGTACATGCA GCAGATGCGT CTGGTCATCG ACGCGCTGCA CCCCGCCGGC
TCTCCGGTGC GCGCCGTGCA CCTCGGCGGC GCAGCGTGCG CGTTCCCGCG CGCGATCGCG
CGCCAGCGGC CACGCTCGCG CCAGCTCGTC GTCGAGCTGG ACGCCGAGCT CGCGCGCCTG
GCCCGCGAGT GGTTCGACCT GCCCCGGGCG CCGGAGCTGC GGGTCCGCAC GCAGGACGCA
CGCGAGGCGG TGAGCACGCT GCGGTCGGGC GAGTGGGACG CCGTCGTCCG CGACGTCTTC
ACGGGGAACC GCGTCCCCAC GCACGTCCGC ACCGTCGAGT TCGTCACCGA CGTGGCCCGC
ACGCTCGCCG ACGACGGCGT CTACCTGGCC AACGGCGTCG ACTCCCCACC GCTGCGCGAG
ACCCGGCGCG AGGTCGCGAC GGTGCGCGAC GTGTTCGACC ACGTCGCGCT CGCCGTCGAG
CCGGCGATCT GGCGGGGCCG CCGCTTCGGC AACGTCGTCG TGATCGGCGC GCACGTCCCG
CTCCCGCTCG AGCAGCTGCG GCGCGGGATG CTCGCCCTCC CCCTGCCCGT GCGGCTCGTC
ACGGGTGACG AGCTGCGCAC GTTCGCCGGC GGCGCCCTGC CGTGGCGCGA CGCGCCCGTC
TCCACGGACG GGACCGACCC CGCGGCCGCC CCCGAGAACG ACGATGCGGC CCGCCCCGTG
GGGACGAGCC GCATCGACGG ATGA
|
|---|
| Protein sequence | MSSRRSRQAP ALRPDALPSG ETGIDTGTVE LERDPDRPNG VMVYVNGVES SYVDLADAEH
LEFEYMQQMR LVIDALHPAG SPVRAVHLGG AACAFPRAIA RQRPRSRQLV VELDAELARL
AREWFDLPRA PELRVRTQDA REAVSTLRSG EWDAVVRDVF TGNRVPTHVR TVEFVTDVAR
TLADDGVYLA NGVDSPPLRE TRREVATVRD VFDHVALAVE PAIWRGRRFG NVVVIGAHVP
LPLEQLRRGM LALPLPVRLV TGDELRTFAG GALPWRDAPV STDGTDPAAA PENDDAARPV
GTSRIDG
|
|---|
| |