Gene Bcav_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2421 
Symbol 
ID7861955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2710170 
End bp2711351 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content77% 
IMG OID643866517 
Productprotein of unknown function DUF58 
Protein accessionYP_002882433 
Protein GI229820907 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0299727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGCC GTCCCGAGCT GCCGCGACTG ACGCGTCGCG GCGGCGGGCT GCTGGGCGTC 
GGCGTCGGGC TCGTCATCGT CGCGGCGCCG CTCGACTCCG TGGAGCTGGG GCGGTTCGCC
GCGCTCGCCG TCGTCCTTCC GCTCATCGCG ATCGTCTGGG GTGCCGTGGC GTCCGTGCGG
ACCTCCCGCG TCAGCGTCGA GCGCACGGTG CACCCGCTCC CGCTGCAGGT GGACTCGCCC
GCCACCGTCC GCATCAGCGC CCGGGGGCGC TCCCTGCCCC GGCACTCGCG GCTCCGGGAG
CGCAGCGCGG CCACGCTCGG CGCGCGGCCC GGGGTGAGCG CCACGGAGTA CCTGCTCCGT
CCGCGCGCCA GGGGTGCGGC CCACCTCGGC CCCGCCGTCC TCCTGCGGGG CGACCCGCTC
GGGCTGGTGG AGTTCACCCA GCGCACCCGC GGATCCGACG ACGTCGTCGT GTGGCCCCGG
GCGATCGCGC TGGGCGACCT GCGCCAGGCC CTCGTCGGGC AGACCGAGCA CCGCCGGGGT
GCGGGCGTCG TCCGGCCGAG CCCGGAGGAC CTGCTGCTGC GCGAGTACCG CCGCGGCGAC
GACCTCCGGC GGGTCCACTG GCGCTCGTCG GCCCGCCACC GCGATCTCAT GGTGCGGGCC
GACGAGCCCG CCAGCCCGAT GACCGCCGAC CTCCTGCTGC AGATCCACTC CGAGCAACGC
AAGTCCGACC TCGAGTGGGC GGTGAGCGCC GCCGCCTCCG TCGCCGTGGC CCTGCTCGAG
GAGCGGTTCT CGGTGCGCCT GAGGATCCCC GGTTCGGGCG CGCAGGAGCG CACGAGCTCG
GCCTCCGTGC CCATGGACAC GCTCGCGCTC GTCGAGCCCA CCGAGCTCGG CGACCGCCGC
GACGCCCTCG TCCACGAGAT CGACGAGATG GCACGGTCCG CCTCCGCCGT CTGCGTCGCC
GTGCTGTGCG CACCCGACGA CCACGCCGTC GCGCGGCTCG CCGACCTCGC CCGAGCCCGC
ACGTGCTGGG CGGTGGTCGT GCCACCCCGC GGAGCGTTGC CGGACCATGT GCGCGCCACC
CTCCAGGTGC TCCAGGCCGC GGGCTGGTCG GCGACCCTCG GGCACGAGGG CGCCCGGATC
GACCAGGCGT TCGGTGGCGC CCGCGCGAGG GTCGCCTCGT GA
 
Protein sequence
MARRPELPRL TRRGGGLLGV GVGLVIVAAP LDSVELGRFA ALAVVLPLIA IVWGAVASVR 
TSRVSVERTV HPLPLQVDSP ATVRISARGR SLPRHSRLRE RSAATLGARP GVSATEYLLR
PRARGAAHLG PAVLLRGDPL GLVEFTQRTR GSDDVVVWPR AIALGDLRQA LVGQTEHRRG
AGVVRPSPED LLLREYRRGD DLRRVHWRSS ARHRDLMVRA DEPASPMTAD LLLQIHSEQR
KSDLEWAVSA AASVAVALLE ERFSVRLRIP GSGAQERTSS ASVPMDTLAL VEPTELGDRR
DALVHEIDEM ARSASAVCVA VLCAPDDHAV ARLADLARAR TCWAVVVPPR GALPDHVRAT
LQVLQAAGWS ATLGHEGARI DQAFGGARAR VAS