Gene Bcav_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2393 
Symbol 
ID7858946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2678326 
End bp2679453 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content74% 
IMG OID643866489 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_002882405 
Protein GI229820879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.339912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.464709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG CCCGTCCGAC GCCGCGCCTG CCGCTGCGCC CCGAGCTGGC CGGGGAGACG 
CCGTACGGCG CGCCGCAGCT CGACGTGCCA GTCCTCCTCA ACGTCAACGA GAACCCGTAC
GCGCCCCCCG CCGCGGTGGT CGCGGAGATC GCCGACGCCG TCACGCGCGC CGCGCACGGA
CTCAACCGGT ACCCGGACCG CGACTTCCGC GAGCTGCGCG GCGGGCTGGC CGCGTACCTC
ACGCGCGAGT CGGGCGTGCC GGGCCTCGAC GCCGACCACC TGTGGGCCGC GAACGGCTCG
AACGAGGTGA TGCTGCACCT TCTCCAGGCG TTCGCCGGCC CCGGCCGCAC CGCCGTCTCG
TTCGCGCCAA CGTACTCGAT GTACCCCGAG TACGCCCGCG ACACCTTCAC CGGATGGATC
GAGGGTCGAC GGCGCGACGA CTTCACGCTC GACGTCGACC ACGTGCTCGC GACCATCGCC
GAGGTGCGGC CCGCCGTCGT CCTCCTCGCG AGCCCGAACA ACCCCACGGG CACCGCCCTG
GCGCTGGCCG AGGTCGAGCG CGTGCTCGCC GCGACGTCGG CGAGCGGTCC CGACGGCGCG
AGCACCGTCG TCGTCGTGGA CGAGGCGTAC GCGGAGTTCC GCCGCCCGGC CACGCCGAGC
GCGTTGGAGC TCCTCGCCGA CCACCCGTAC CTCGCCGTCA CCCGGACGAT GTCCAAGGCG
TTCGCGCTCG CGGGCGCTCG TGTCGGTTAC CTCGCGGCGG CTCCCGCCCT GGTCGACGCC
CTGCGCGTGG TGAGGCTGCC GTACCACCTG TCGGCGGTGA CGCAGGCGGT GGCGCTCGCT
GCGCTGCGGC ATACCGACAC GCTGCTGGGC CAGGTCGCCG TGCTGCGCGA GGAGCGCGAC
TCGCTCGTCA CCTGGCTGCG GGGCAAGGGT CTGGACGCCG CCGACTCGGA CGCCAACTTC
GTGCTGTTCG GGACGTTCGA GGATCGCGAG CGGGTGTGGC AGAGTCTGCT CGACGCCGGC
GTGCTCATCC GCGTGGTCGG GCCGCCGGGC TGGTTGCGGG TGTCGGTCGG CACGCCGCAG
GAGAACGCGG CCTTCCGGGC CGCCCTCGAG GAGGTGCTGG AGCCGTGA
 
Protein sequence
MTTARPTPRL PLRPELAGET PYGAPQLDVP VLLNVNENPY APPAAVVAEI ADAVTRAAHG 
LNRYPDRDFR ELRGGLAAYL TRESGVPGLD ADHLWAANGS NEVMLHLLQA FAGPGRTAVS
FAPTYSMYPE YARDTFTGWI EGRRRDDFTL DVDHVLATIA EVRPAVVLLA SPNNPTGTAL
ALAEVERVLA ATSASGPDGA STVVVVDEAY AEFRRPATPS ALELLADHPY LAVTRTMSKA
FALAGARVGY LAAAPALVDA LRVVRLPYHL SAVTQAVALA ALRHTDTLLG QVAVLREERD
SLVTWLRGKG LDAADSDANF VLFGTFEDRE RVWQSLLDAG VLIRVVGPPG WLRVSVGTPQ
ENAAFRAALE EVLEP