Gene Bcav_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2378 
Symbol 
ID7858931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2668187 
End bp2669332 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content74% 
IMG OID643866474 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_002882390 
Protein GI229820864 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0462853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC CTGACGACAC CCGCGCGCCC GACGACGCCG GTGCTCCCGA CGCCCCCCCG 
ATCAGCCCGA CGGACGCCGC CGCCGTCGGC GCCGCGCTCG ACGCGGCCCT CGCCGCCGTC
GACGGCGCCG GCGACCTCGA TGCGCTCAAG GACGTCCGCC TGGCCCACGC GGGCGACCGG
AGCCCGCTGG CGCTCGCGAA CCGCGCGATC GGCACGATTC CGGGCGCCGA GCGGGCGGCG
GCCGGCAAGG TCGTCGGCGG CGCCCGCGGG CGCCTCGCGA AGGCCCTCGC CGCCCGGACG
GCGGAGCTCG AGGAGGCCGA GGCCGCGCGC GTGCTGCGCA CCGAGACGAT CGACGTCACC
CTCCCGCTGG CGCGGGGCGA CGCCGCGCTG CGCGGCCTGG CGACCCTCGG TGCGCGCCAC
CCGCTCGCCC GGCTGTCGGA GGAGATCGCC GACACGTTCA TCGCGATGGG CTGGGAGATC
GCCGAAGGCC CCGAGGTCGA GCACGAGTGG TTCAACTTCG ACGCCCTGAA CTTCGTGCCG
GACCACCCGG CGCGGCAGAT GCAGGACACG TTCTTCGTGG CGGACCCCGG CGAGGAGCCG
GGGGAGCCGG GCAAGGCGCA CCTCGTGCTG CGCACCCACA CGTCCCCGGT GCAGGCGCGC
GCCCTGCTCG AACGCGACCT GCCCGTCTAC ATCGTCTGCC CCGGCAAGGT CTTCCGCACG
GACGAGCTCG ACGCCACGCA CACGCCCGTC TTCCACCAGG TGGAGGGCCT CGCCGTCGAC
CGCGGCCTGA CGATGGCGCA CCTGCGCGGG ACGCTCGACC ACTTCGCGCG GGTGATGTTC
GGGCCCGAGG CGCGCACCCG GTTGCGCCCG AACTTCTTCC CGTTCACCGA GCCGAGCGCG
GAGATGGACC TCTGGTTCCC GCAGAAGAAG GGCGGCGCCG GCTGGATCGA GTGGGGCGGC
TGCGGCATGG TCAACCCGAA GGTGCTGCGC AGCGTCGGCG TCGACCCGGA CGTCTACTCC
GGGTTCGCGT TCGGCATGGG TATCGAGCGG ACGCTCATGC TCCGCCACGG GATCGAGGAC
ATGCGGGACA TGGTCGAGGG CGACGTGCGG TTCTCCCGCG CGTTCGCCCC GGGAGGTGAC
GTCTGA
 
Protein sequence
MTLPDDTRAP DDAGAPDAPP ISPTDAAAVG AALDAALAAV DGAGDLDALK DVRLAHAGDR 
SPLALANRAI GTIPGAERAA AGKVVGGARG RLAKALAART AELEEAEAAR VLRTETIDVT
LPLARGDAAL RGLATLGARH PLARLSEEIA DTFIAMGWEI AEGPEVEHEW FNFDALNFVP
DHPARQMQDT FFVADPGEEP GEPGKAHLVL RTHTSPVQAR ALLERDLPVY IVCPGKVFRT
DELDATHTPV FHQVEGLAVD RGLTMAHLRG TLDHFARVMF GPEARTRLRP NFFPFTEPSA
EMDLWFPQKK GGAGWIEWGG CGMVNPKVLR SVGVDPDVYS GFAFGMGIER TLMLRHGIED
MRDMVEGDVR FSRAFAPGGD V