Gene Bcav_2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2357 
Symbol 
ID7858906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2640161 
End bp2640991 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content75% 
IMG OID643866449 
Producthemolysin A 
Protein accessionYP_002882369 
Protein GI229820843 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0122275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTC GGCTGGACGT CGAGCTCGTC CGTCGCGGTC TCGTACGCTC ACGCACCCAT 
GCGCAGAGCC TCGTCTCCTC GCGGCGGGTG CTCGTCGACG GACGTGCCGC CACGCGCGCC
GCGACGCCGG TGGATGCGGC GTCGGCGCTG CAGGTGACGG GGGGCGAGAC GCCGGACTAC
GTGTCCCGGG CCGGGCACAA GCTCGCCGGT GCTCTCGACG CCCTCGGGCC GGCGGCGCCC
CTCGTCGCGG GTCGTCGCGC CCTCGACGCC GGTGCGTCCA CCGGCGGGTT CACTGACGTG
CTGCTGCGCC GGGGCGCGGC GCACGTCGTC GCCGTCGACG TCGGCACCGA TCAGCTCGTG
CCCGAGCTGC GCGCGGATCC CCGGGTGACC GTCCTCGAGC GCACGAACGT CCGCGACCTC
CGGCCGGACG ACGTCGCACC TGCGCCGCAA CTCGTGGTCG GCGACCTGTC CTTCATCTCC
CTCACCCTCC TGCTCGAGCC GCTGGCCGCG TGCGCCGCAC CCGACGCGGA GCTGCTGCTG
CTGGTCAAGC CTCAGTTCGA GGTCGGCCGC GAGGCGCTCG GCGCAGGCGG GCTCGTGCGC
TCCCGCGAGC TACGTCGCGC GGCCGTCGGC GCCGTGGCGG ACCGTGCTGG CGAGCTCGGG
CTCGACCTCC TGGCGGTGAC GCCGAGCCCT CTGCCCGGGT CGAACGGAAA CATCGAGTAC
TTCGTGCTGC TGCGCGCCGG CGGGCCGCGG CCTGATGCTC CAGGGCGGCA GCAGCGGCAC
GAGATGATCG CCGCGGCGTC GGCGTCCGAA CCCGACGTGA GGACGACGTG A
 
Protein sequence
MGARLDVELV RRGLVRSRTH AQSLVSSRRV LVDGRAATRA ATPVDAASAL QVTGGETPDY 
VSRAGHKLAG ALDALGPAAP LVAGRRALDA GASTGGFTDV LLRRGAAHVV AVDVGTDQLV
PELRADPRVT VLERTNVRDL RPDDVAPAPQ LVVGDLSFIS LTLLLEPLAA CAAPDAELLL
LVKPQFEVGR EALGAGGLVR SRELRRAAVG AVADRAGELG LDLLAVTPSP LPGSNGNIEY
FVLLRAGGPR PDAPGRQQRH EMIAAASASE PDVRTT