Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_2351 |
Symbol | |
ID | 7858900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 2632683 |
End bp | 2634299 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643866443 |
Product | virulence factor MVIN family protein |
Protein accession | YP_002882363 |
Protein GI | 229820837 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.257245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0163259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTCG GGGCGCGCCG GCTCGTCGCG GGGCTCGCCG GGGCGACGGC GGCGATCACC GCGCTGACGC TGCTCTCCCG CGTCGTGGGC TTCGGCCGGT GGTTCGCGCA GAACGCGTGG GTCGGGCCGA ACGAGGTGGG CACCGCCTAC GCGACGGCGA ACTCGGTGCC CAACGTGCTG TACGAGGTCG CCGCGGGTGG TGCGCTCGCG GGCGCCGTCA TCCCCTTGCT CGCCGCGCCC CTGGCGGCGC GGATGCGTGG CGACGTCGAC CGGATCTCCT CGGCGCTGCT CGGCTGGGCG CTCGTGGCGC TGGTGCCGCT CGCGGTGGTG ACGGCGCTGC TCGCGCGGCC CGTCGCCACG CTGCTGCTGT CGAGCCGCGG CGTTCCGGCG TCGCAGGAGC AGGTCGAGCT GGCGACCACG CTGCTGCGCA TCTTCGCTCC GCAGATCCCC CTGTATGGGA TCGGCGTCGT GCTCACCGGC GTGCTCCAGG CGCAGAAGCG GTTCCTGCTG CCCGCGTGCG CCCCGCTCGC CTCCAGCGTC GTCGTCATCG CGTCGTACTA CGCGTTCGGC CTGCTCGCGG GGCCGGAGCC GACGCCCGGA GCGCTGAGCT CGTCAGCTGT GGCGTGGCTG GGGTGGGGGA CGACGGCGGG AGTCGCCGCG ATGAGCCTGC CGCTGCTCGT GCCTGTGGTG GCCTCGGGCG TGCGCCTGCG CCCGGCGTTG CGGTTCCCGC CCGGGGTCGC TCCCCGGGCG CGGCGGCTCG CGGCCTCCGG GATCGGCACG CTGCTCGCCC AGCAGGCGAG CGTCGTCGTC GCCGTGGTGC TCGCGAACCG GTTCGGTCAG CTCGACGGCA CCGTGAGCGT CTACCAGTAC TCCCAGGCCG TGTACCTGCT GCCGTACGCG GTGCTCGCCG TCCCCCTCGC GACGGCGATG TTCCCGCGAC TCGCCGAGCA CGCGAGCGCT CGCGACTCCC GCGCGTTCGC GCGCGACACG AGCGCCTCGA CGCGTGCGAT CGTCGTCGCG GCCCTGGCGG GGGCAGCCGG GCTCGTCGCC GCGGCCGACC CCGTCCAGAC GGTCTTCGCG ACGTACGCGC GGGGAGATGT CAGCGGGATG GCCGGCGCCG TCACGGCAAT GGCTCCCGGC CTCGTCGGCA TGGCGCTCCT GTTCCACCTC AGCCGGGCGC TGTACGCCCT CGAGCACGCG CGCGCCGCCG TCGTCGCGAC GTCGATCGGC TGGGTCACCG TGGCGGTGGC CTCCTGGGTC GCCGTCATGG TCCTGGCTCC CGACGGCGAC GACGGCCCGG CCGCGTTGCT CGGGCTCGGC ATCGGCACGG CGGTCGGGAT GACGGTGGCC GCGATCGCTC TTGCCGTCGC CGTGCGGCGG GTCGCGGGAT CCGCCGCCCT CGCCGGGATC GGCCGCACGA CGGCTGTGGC GCTCGGCGGC GCCGTGGTCG GTGCGCTCGC CGGGCGCCTG GTCGCCGGCA GCATCGCCGG CCCGGACGCC GGCGCGGGCG TCGCACTGCT CGCCGGCCTG GTCGGCGGGG TCCTCGCCCT CGCTGCGGTC GGCGCCGCGA GCGCCGCCGC CGACCGGTCC CTCGTGGCGA TCGTGAGGCG CGCATGA
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Protein sequence | MSVGARRLVA GLAGATAAIT ALTLLSRVVG FGRWFAQNAW VGPNEVGTAY ATANSVPNVL YEVAAGGALA GAVIPLLAAP LAARMRGDVD RISSALLGWA LVALVPLAVV TALLARPVAT LLLSSRGVPA SQEQVELATT LLRIFAPQIP LYGIGVVLTG VLQAQKRFLL PACAPLASSV VVIASYYAFG LLAGPEPTPG ALSSSAVAWL GWGTTAGVAA MSLPLLVPVV ASGVRLRPAL RFPPGVAPRA RRLAASGIGT LLAQQASVVV AVVLANRFGQ LDGTVSVYQY SQAVYLLPYA VLAVPLATAM FPRLAEHASA RDSRAFARDT SASTRAIVVA ALAGAAGLVA AADPVQTVFA TYARGDVSGM AGAVTAMAPG LVGMALLFHL SRALYALEHA RAAVVATSIG WVTVAVASWV AVMVLAPDGD DGPAALLGLG IGTAVGMTVA AIALAVAVRR VAGSAALAGI GRTTAVALGG AVVGALAGRL VAGSIAGPDA GAGVALLAGL VGGVLALAAV GAASAAADRS LVAIVRRA
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