Gene Bcav_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2335 
Symbol 
ID7861947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2617149 
End bp2617724 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content70% 
IMG OID643866428 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_002882348 
Protein GI229820822 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.610109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.712132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGC TCGAGCAGCT GTACCAGCAG GTGATCCTCG ACCACGCCCG CGAGCGGCAT 
GCGTACGGTC TGCGCGAGGG GGCGGCGGGG GAGTCGTTCC AGGTCAACCC GACATGCGGC
GACGAGGTTC GCCTGCGGGT GCACATCGAC TTCGGGTCGG CGGGCGACGG TGGCATCGGC
GGAGCTGACA GCTTCGGCGG TGCTGGTGGC GGCGACGTCG GCAGTGGTGT CCTCACCGGT
GCGGGGGCCA GCGGCCGTGA GGTGAGCGCC CGACCTCGGA TCTCCGGCGT GAGCTGGGAG
GGCCACGGCT GTTCGATCTC GCAGGCGTCG ATCTCGGTGA TGTCGGACCT CGTCACGGGC
ACCGACGTCC TGACGGCGGA CGCGTTCGCC GAATCGTTCC GCGCGCTGAT GCACCACCGC
GGCGAGCCGC TCGGCGACTC CCGCGACGAG GAGCTCGGCG ATGCGGCGGC GTTCGTCGGC
GTAGCGAAGT ACCCAGCGCG TGTGAAGTGC GCGCTGCTCG GCTGGATGGC CCTGCGCGAC
GCTCTCGCGC ACGCACTCGT GAAGGAGGAG TCATGA
 
Protein sequence
MSSLEQLYQQ VILDHARERH AYGLREGAAG ESFQVNPTCG DEVRLRVHID FGSAGDGGIG 
GADSFGGAGG GDVGSGVLTG AGASGREVSA RPRISGVSWE GHGCSISQAS ISVMSDLVTG
TDVLTADAFA ESFRALMHHR GEPLGDSRDE ELGDAAAFVG VAKYPARVKC ALLGWMALRD
ALAHALVKEE S