Gene Bcav_2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2317 
Symbol 
ID7861929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2601925 
End bp2603154 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content76% 
IMG OID643866410 
Productglycogen synthase 
Protein accessionYP_002882330 
Protein GI229820804 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR02149] glycogen synthase, Corynebacterium family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCG ACTTGCTCAC CAGGGAGTAC CCGCCGCACG TCTACGGCGG CGCTGGGGTG 
CACGTCGCGG AGCTCGCCCG GGTGCTCGCG CCGCTGCTGG ACGTGCGCGT GCGCGCCTTC
GACGGACCGC GCGAGGCGGA CGACGGCGGC CCGCAGGTCA CGGGTTACGC GCCCCTTCCG
GAGCTGGCCG GTGCGAACGC CGCCCTCGGC ACGTTCGGCG TCGACCTGGC GATGGCCGCC
GACGTGGCGG GCGCCGACCT CGTGCACTCC CACACCTGGT ACGCGAACCT CGCCGGGCAT
CTGGCGTCGC TGCTGCACGG CGTCCCGCAC GTCGTCACGG CGCACAGCCT CGAGCCGCTG
CGGCCGTGGA AGGCCGAGCA GCTCGGCGGC GGGTACGCGC TCTCGTCGTG GGCGGAGCGC
ACGGCGTACC TCGGCGCGGC CGGCGTCATC GCCGTCAGCG CCGGGATGCG TGCCGACATC
CTGCGCAGCT ACCCGGACGT CGACCCCGAC CGGGTGCACG TGGTGCACAA CGGGATCGAC
CTCGACGGGT GGCGCCGGCC GGTCGACGCG GACGGCGCGC TCACGCCCGA GGCGCGGGCC
GCCGCCGTCG CTCACGGCGT CGACCCCGAC GCGCCGGCGG TGGTGTTCGT CGGCCGGATC
ACGCGGCAGA AGGGGCTGCC CTACCTGCTG CGCGCCGCCC GCGCCCTGCC GCCCGACGTC
CAGCTCGTGC TGTGCGCCGG CGCGCCCGAC ACCCCGGAGA TCGCAGCCGA GGTGAGCGGG
CTCGTCGCGG AGCTCGCGCG GGAGCGCTCG GGCGTCGTCT GGATCGAGCG GATGCTGCCG
CGCGAGGAGC TCGTGGCCGT GCTCGCGGCG TCCACCGTGT TCGTCTGCCC CTCGATCTAC
GAGCCGCTCG GCATCGTGAA CCTCGAGGCA ATGGCGGTGG GCCTGCCGGT CGTCGGCTCG
GCCACCGGGG GGATCCCGGA GGTCGTCGAC GACGGCGTCA CGGGGCTGCT CGTGCCGCTC
GCCCAGGAGC AGGACGGGAC CGGCACCCCG CTCGACCCCG AGCGGTTCGA GGCGGACCTC
GCCGCGGCGC TGACGGCGCT CGCGACCGAC CGGGCACGGG CCGCGGCGAT GGGCCGCGCG
GCGCGCACCC GGGTCGAGGA GCACTTCTCC TGGGACGCCG TCGCCGCCCG CACCGTCGAG
GTCTACGAAC GGGTGCTGGC GCGCGCCTGA
 
Protein sequence
MRVDLLTREY PPHVYGGAGV HVAELARVLA PLLDVRVRAF DGPREADDGG PQVTGYAPLP 
ELAGANAALG TFGVDLAMAA DVAGADLVHS HTWYANLAGH LASLLHGVPH VVTAHSLEPL
RPWKAEQLGG GYALSSWAER TAYLGAAGVI AVSAGMRADI LRSYPDVDPD RVHVVHNGID
LDGWRRPVDA DGALTPEARA AAVAHGVDPD APAVVFVGRI TRQKGLPYLL RAARALPPDV
QLVLCAGAPD TPEIAAEVSG LVAELARERS GVVWIERMLP REELVAVLAA STVFVCPSIY
EPLGIVNLEA MAVGLPVVGS ATGGIPEVVD DGVTGLLVPL AQEQDGTGTP LDPERFEADL
AAALTALATD RARAAAMGRA ARTRVEEHFS WDAVAARTVE VYERVLARA