Gene Bcav_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2314 
Symbol 
ID7861926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2599657 
End bp2600202 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content73% 
IMG OID643866407 
Productprotein of unknown function DUF107 
Protein accessionYP_002882327 
Protein GI229820801 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACT CCGGCTGGAT CTGGTGGCTC GGTGCCACGC TGCTCCTCGG CGTCATCGAG 
ATGCTCGTCG TCGACCTGCT GTTCCTCATG TTCGCCGGCG GCGCGCTGGC CGCGACGATC
GTCGCGGCGC TCGGTGCCCC GCTCTGGCTG CAGATCACCA CGTTCGGCGT CGTCTCCGCC
CTGCTCGTGG TCGCCGTGCG GCCGTGGGCG CTGCGGAAGT TCAAGAACAC GACGCCGGAG
ACGGCGACCA ACATCGCCGC CCACGTGGGC CGCCCGGCCG TCGTCGTCGC CGACGTCTCG
ACGATGGCGG GGCGGGTCAA GCTTGCCGGG GAGGTGTGGA CGGCGCGCAC CGAGGAGTCA
GGTGTCCTGC CCGTCGGCAG CCTCGTCCGG GTGATCCGGA TCGACGGGGC GACGGCCGTC
GTCGTCCGGG AGGTCCCGCA GCAGGCGGGG CCGGGCGCCG CGCCCGGCGC GCCGTACGGT
CCGCCGCCCA CCGGCCCGTA CCACCAGCCT GGACCGGTCC CACCGCCGGG ATCACCGACG
ACCTGA
 
Protein sequence
MDNSGWIWWL GATLLLGVIE MLVVDLLFLM FAGGALAATI VAALGAPLWL QITTFGVVSA 
LLVVAVRPWA LRKFKNTTPE TATNIAAHVG RPAVVVADVS TMAGRVKLAG EVWTARTEES
GVLPVGSLVR VIRIDGATAV VVREVPQQAG PGAAPGAPYG PPPTGPYHQP GPVPPPGSPT
T