Gene Bcav_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2309 
Symbol 
ID7861921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2592946 
End bp2593560 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content74% 
IMG OID643866402 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002882322 
Protein GI229820796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.601552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGC GCGTCGTCCG CACCCGGTTC GCGATCGTGG CGGCGGGCAC CGACCTCTTC 
CTCGAGCGCG GTTACGTGGG GACGAGCCTG GACGAGGTGG CGGCTCGTGC GGGCGTCGCG
AAGCGCAGCG TCTACAACAA CTACGCGGAC AAGGAGGAGC TCTTCCGCGC CGTCGTCCTC
ACCGCGACCG GCACGACCTC GGCCTTCGTC GCCGAGATCG TGTCGGCGCT CGAGGAGCCC
GACGACCTCG AGGAGGCGAT GCGCGACCTC GCCCGACGGC AGCTGCGGGC GGCGACGAGC
ACGCGGCTCG TCCGGTTGCG GCGTCTGCTC ATCGGCGAGG TGAGCCGGTT CCCCGACCTG
GCGCGGGAGT ATGCGGAGCG GGTCCCGGGG CGCGTCGTCG CCGCGTTGGC GGCGGCGTTC
GAGCAGCTGA CGGCGGCGGG ACGGCTCCGG GTCGAGGACC CGGAGCGGGC GGCGGAGCAC
TTCGCGTTCC TCGTGCTCGG CAGTTCGCTG GACCGGGCGC TGCTCGGCGA CGCGCGGGAG
CTCGACGACG CCGAGGTCGC TGCGATCGCC GACTCCGGGG TGACGGCGTT CCTCGCCGCG
TACGGCACGG GCTGA
 
Protein sequence
MDPRVVRTRF AIVAAGTDLF LERGYVGTSL DEVAARAGVA KRSVYNNYAD KEELFRAVVL 
TATGTTSAFV AEIVSALEEP DDLEEAMRDL ARRQLRAATS TRLVRLRRLL IGEVSRFPDL
AREYAERVPG RVVAALAAAF EQLTAAGRLR VEDPERAAEH FAFLVLGSSL DRALLGDARE
LDDAEVAAIA DSGVTAFLAA YGTG