| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2293 |
|---|
| Symbol | |
|---|
| ID | 7861905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 2578434 |
|---|
| End bp | 2580563 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643866386 |
|---|
| Product | iron-hydroxamate transporter permease subunit |
|---|
| Protein accession | YP_002882306 |
|---|
| Protein GI | 229820780 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.119028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.926797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAT CCGCGGCCGG GTCGTCGTCC GACGTCGACG ACCCGGCAGC GATCGCGCTC
CCGGACCCGA CGGGCCAGCC GCACCGCGTG CGGCGTTCCC TCGGGATGGT CGGCGTGTAC
ACGCTGACCG GCGCGCTCGT CGCCCTGCTC TGCGCCGTGC ACGTCACGCA GGGAACCTCC
GACCTCGGTG CGTTCGACCT GCTCATGGCG TTGTTCACGG GGCTGGACGA CACGGACGCC
GCCGTCCTCG TCGCGTCGCG ACTCCCGAGG CTCGGCGCCG GCGTCATCGT CGGCGTCGTG
CTCGGCGCGG CGGGCTCGGC GCTGCAGTCC GTGGCCCGCA ACCCGCTGGC GTCACCCGAC
ACGCTCGGCG TCAACGCCGG CGGCTACTTC GCCGTCGTCG CCGTCGCCGC GTTCGGCCTC
GTGGTTCCGC TGCCGGTCGC GTGGACGCTG GCGTTCCTCG GCGGGCTCGC CGCCGCGGCG
CTCGTGCTGA CGCTCTCGCG CGCCGGGGCC GCCGGTCCCA CGCGCCTGGT GCTGGCGGGG
TCGGCGATCA CGCTGGCGCT GTCCTCGGTC ACGTCGCTGC TGCTCATCCT GCGGGCGCAG
GAGACGACCG GGCTCTTCGC GTGGGGAGCG GGCTCGATCG TGCAGTCCGG CGCGGAGAAC
GTGCTGCGGA TCGCGCCGGT CGCGCTCGTC GGCGTCGCGC TCCTCCTGCT GTACAGCCGG
CGGCTCGACC TGCTCGCGCT CGGGGACGAC GCCGCTCGCG TCCTGGGCGT GGACGTGCGC
CGGACGCGGG CCGGAGTGAT CGTGGTCGCC GTGCTGCTGG CCGCGTCGGC CGTGAGCGTC
GCCGGGCCGA TCGGCTTCGT GGGCCTCGCG GCGCCCGTCA TCGCCCGTCT CCTGGCGCGG
CTCGTGCCGG GGATGCACCA CCACGCGGCG CTCATCCCGC TCGCGGCGCT GACCGGCGTC
GGCGTCGTCA TCGGCGCCGA CGTCCTCATC CGCATCCCGA TGGGTGGCCA GGGCGGCGTC
CTCGTGCCGA CCGGCGTCGT CACGTCGATC CTCGGGGCGA TCATCCTCGT CGTCCTCGCC
CGGCGCCTGC GGGACTCGGG ATCCCCGGTC GCTGCGGGGA TCGGGGCGCG CCTGCGGACG
GTGCGCTGGG CCTGGGGCGT GGCCGGCGTC CTTCTCGTGT GCGTCGTCGC CGCAGCGGTC
GCGGGCGTGC TCCTGGGCGA CCACAAGCTC CTGCTCGGCG ACGTCGCGAA CTGGCTCTCC
GGGCAGTCCG GCCGCGTGGT CACGGCGGTG ATGACGGAAC GCGTCCCCCG TGTTCTCGTG
GCGCTCCTGG GCGGCGCCGC GCTCGCCGTC GCCGGCACCA TGGTCCAGGC GGTCGCGCGC
AACCCGCTCG CGGATCCCGG ACTGCTCGGG ATCACGGGCG GGGCGAGCTT CGGGGCCGTC
ATCGTGCTCT CCCTCGTGCC GGTCGCCGCG ACCTGGTTCG TGTCGGTCGG CGCCGGGCTC
GGTGCCCTGG TGGCGTTCGG GCTCGTGTAC GCACTCTCGG CGCGCGGCGG GCTCCACTCC
GACCGGGTGG TGCTGGTCGG CGTCGGGGTC AGCGCGGGGG CGACGGCGCT GACCACGCTC
GTCATCATCG CGACGAGCCC GTACAACGTC GCGTACGCGC TGACCTGGAT GTCCGGGACC
ACGTACGGGC GCACGACGGC GAACGTGTGG GTCGTCGTCA TCGCTCTCGT GCTCGTCGTG
CCTCTCGCGT TCGCGGGCCG GCGCGAGCTC GACCTGGTGA CGCTCGACGA CGACGCCCCA
CGGGTGCTCG GCCTGCGGCT GTCCCGTGTC CGGCTCGTCT TCCTCACCGC GGCCGCGCTG
CTGACGGCGG CGGCGGTGAC CGCCGTCGGC CCGATCGGCT TCGTCGGCCT GGTCGCCCCG
CACGCGGCGC GGGCGCTCGT CGGCGCCCGG CACGTGAGGG TCATCGGGAT CGCCGCCCTG
CTGGGCGCCG TGCTGGTGAG TCTCGCGGAC ACCGCGGGGC GGACGGTGAT CGCCCCGGCG
CAGGTGCCGG CAGGCCTGCT CGTCGCGCTC CTCGGTGCGC CGTACTTCGT GTGGCTGCTG
TGGCGGGCAC GCGGCCGGGA GGCGACGTGA
|
|---|
| Protein sequence | MSASAAGSSS DVDDPAAIAL PDPTGQPHRV RRSLGMVGVY TLTGALVALL CAVHVTQGTS
DLGAFDLLMA LFTGLDDTDA AVLVASRLPR LGAGVIVGVV LGAAGSALQS VARNPLASPD
TLGVNAGGYF AVVAVAAFGL VVPLPVAWTL AFLGGLAAAA LVLTLSRAGA AGPTRLVLAG
SAITLALSSV TSLLLILRAQ ETTGLFAWGA GSIVQSGAEN VLRIAPVALV GVALLLLYSR
RLDLLALGDD AARVLGVDVR RTRAGVIVVA VLLAASAVSV AGPIGFVGLA APVIARLLAR
LVPGMHHHAA LIPLAALTGV GVVIGADVLI RIPMGGQGGV LVPTGVVTSI LGAIILVVLA
RRLRDSGSPV AAGIGARLRT VRWAWGVAGV LLVCVVAAAV AGVLLGDHKL LLGDVANWLS
GQSGRVVTAV MTERVPRVLV ALLGGAALAV AGTMVQAVAR NPLADPGLLG ITGGASFGAV
IVLSLVPVAA TWFVSVGAGL GALVAFGLVY ALSARGGLHS DRVVLVGVGV SAGATALTTL
VIIATSPYNV AYALTWMSGT TYGRTTANVW VVVIALVLVV PLAFAGRREL DLVTLDDDAP
RVLGLRLSRV RLVFLTAAAL LTAAAVTAVG PIGFVGLVAP HAARALVGAR HVRVIGIAAL
LGAVLVSLAD TAGRTVIAPA QVPAGLLVAL LGAPYFVWLL WRARGREAT
|
|---|
| |