| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2287 |
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| Symbol | |
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| ID | 7861899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 2569888 |
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| End bp | 2573472 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643866380 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002882300 |
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| Protein GI | 229820774 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.361309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.995988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTACGA CTGACGGTGC CCGGTACGCG GAGCTGCACG CCCACTCGGC GTTCAGCTTC
CTCGACGGCG CGAGCCAACC CGAGGCGCTC GTGGCGGAGG CCGCGCGGCT CGAGCTGGAC
GCCGTGGCGA TCACAGACCA CGACGGCCTG TACGGCGTCG TCCGCTTCGC GGAGGCCGCC
CGGGCGCTCG GGATGCGGTC GGTGTTCGGC GCCGAGCTGA GCCTCGACCA GCGCACGCCC
GCCACCGGCG TCCCGGACCC GGACGCGACC CACCTCGTCG TCCTCGCCCG CGGACCGGCC
GGGTACCACC GGCTCTCGCG CGCGATCGCG ACAGCGCACC TCGCCACCGG GAAGAAGGGC
GAGCGCGACT ACGGGCACGC CGTGGGCCTG GACCCGCTCG AGGTGCTGGC GGAGCAGGCG
GCGGGCGACT GGCTCGTGCT CACCGGCTGC CGCAAGGGCG CCGTCCGGCG TGCCCTTGAC
GGGGGAGCGG ATGGAGCCGA CGGCGCCGGG GGAGCAGGCG GAGCAGGCAG CATCGCCGGC
GCGGAGCACG GCGAACGGGC CGCAGCCCGG GAGCTCGACC GGCTCGTGGC GCTGTTCGGG
CGGGACAACG TCGCGGTCGA GCTCACCGAC CTCGGCGCCC CAGCGGACTC CGCGCGGTGC
GACACCCTCG CGGACCTCGC CGCCCGAGCG GGACTACCCG TGGTCGCGAC CGGCGGCGTG
CACTGCGCGC ATCCGCGGGA GGGGCGGCTC GTCGACGTCC TGGCCGCGGT CCGGGCGCGG
CGCTCGCTCG AGGAGATCGA CGGGTGGCTG CCGCCGGCGC CGGCACACCT GCGCAGCGCG
GACGAGATGC TCGCCCGGCA CGCCCGGCAC CCGCAGGCCG TCCGCACGGC CGCCGAGCTC
GGACTGGAGT GCGCCTTCGA CCTCACCCTC GTGGCCCCGC GGCTGCCGCC GCACCCGGTG
CCTCCCGGGT ACGACGAGGC GTCCTGGTTG CGGGAGCTCA CGATGCGGTG CGCGCGCACC
CGCTACGGAA CCAGGGACGA GCGGCCCGAC GCGTACGCGA TCATCGATCG CGAGCTCGAC
ATCATCGTGC GGCTCGGCTT CCCGGGCTAC TTCCTCATCG TCCACGAGAT CGTCGACTTC
TGCGTGCAGC AGGGCATCCT CTGCCAGGGC CGGGGGTCGG CGGCCAACTC GGCCGTCTGC
TACGCGCTCG GGATCACCGC CGTCGACGCC GTCCAGCACA AGCTCCTGTT CGAGCGGTTC
CTCTCCGACG GGCGGTCCGG CCCGCCGGAC ATCGACGTCG ACATCGAGTC GGGCCGGCGC
GAGGAGGTCA TCCAGTTCGT CTACACCCGG TACGGGCGCG AGCACGCCGC CCAGGTCGCG
AACGTCATCT CCTACCGGCC GCGGTCGGCC GTGCGCGACG CCGCGCGCGC GTTCGGGTAC
GACGTCGGTC AGCAGGACGC CTGGTCGAAG GGCATCGAGC GCTGGGGCAC GCTGCGCGGC
CCGGATCCCG GCAACCCCGA CCCGGCCGTG AAGGCGAACG CCACGAGCAC CTCGAGCACT
TCGAGCAGCC CCTCGCGGGC CACGGGCACG GCCGCCGGTC CGAAGATCCG CGAGAAGGGC
GTCGACACCC ATGACCCGGC GCCTCCTCGG CACGCCCCGG CGTCGGCCCG TGAGATGGGC
GAGATCCCGA ACCACGTGCT CGACGTCGCG GAGCAGATGC TTCGACTCCC GCGGCACCTC
GGCATCCACT CGGGCGGCAT GGTGCTGTGC CACCGGCCGG TCATCGAGGT GTGCCCGGTG
GAGTGGGCGA CCATGCCGGG CCGCACCGTG CTGCAGTGGG ACAAGGACGA CTGCGCCGAC
GCCGGGCTGG TGAAGTTCGA CCTTCTCGGC CTGGGGATGC TCACCGCCCT CCGGCTCGCG
TTCGAGCAGG TGGAGGCGAC GAGCGGGGAG CGACTGGCGC TGCACTCGCT GCCGCAGGAG
GACCCGAAGG TGTACGAGCT GCTGTGCGCC GCCGACACGG TCGGGGTGTT CCAGGTCGAG
TCCCGCGCGC AGATCTCCAC GCTGCCTCGG CTGAAGCCAC GGAACTTCTA CGACATCGTC
GTCGAGGTCG CCCTCATCCG GCCCGGCCCG ATCCAGGGCA ACTCCGTGCA CCCGTTCATC
CGGCGTCGCA ACGGGAAGGA GAAGGTGACG TACCTGCACC CGCTACTCGA GGGCGCGTTG
TCGAAGACGC TCGGGATCCC GCTGTTCCAG GAGCAGCTCA TGCAGATCGC GATCGACGTC
GCCGGGTTCA GCGGGTCCGA GGCGGATCAG CTGCGCCGAG CGATGGGGTC GAAACGGTCG
CTCGAGAAGA TGGAGGCCCT GCACGAACGC CTGCTCGCCG GGATGGCCGA CCGAGGCGTC
CCCCGGGACG TCGGGGAGCA GATCTACGAC AAGCTCAAGG CGTTCTCCGA CTTCGGCTTC
CCGGAGTCGC ACGCGTTCTC GTTCGCCTAC CTCGTCTACG CCAGCGCGTG GCTCAAGATC
CACCACCCGG AGGCGTTCTT CGCCGGGCTC CTCGGCGCGC AGCCGATGGG GTTCTACTCG
CCGGCCTCGC TGGTGGCGGA CGCCCGGCGG CACGGCGTCG TGGTGCGTCG GGCGAGCATC
GCCGACTCGG CGGTGCACGC GCTGGTCGAG CACGGTGCGG CGGACCACGG CGCGGTGGGC
CTCGTGCCAC GTGCGACGCA GTCGAGCGAG ACCTGGCTCG TCGACGCGGG GAAGGCGGAC
GCGCGCGGGG CGGCCGCCGT CGACCCCGCC CTCCCTCTCG ACCCGGCGGC GGACGCCGAG
GACGCCGACG GCGGCCCCTC GGGGCGGAGG TTCGCCGTGC GGCTCGGGCT CGCCCCGATC
CGCGGCATCG GGGAGAAGAC CGCCGAGCGC ATCGTGACCG AGCGCGACCG GGCGCCGTTC
GCCGATGCGC AGGACCTGGC ACGCCGGGTC AGGCTCACCG CGGCGCAGCT CGAGGCGCTC
GCGACGGCGG GCGCGCTGCG GTGCTTCGGG ACGTCACGCC GGGAGGCGCT GTGGTCGGCC
GGCGCGCTCG CGGGGGAGAG CGGCCGCGTG CACCTCACGA GTCAGGGAAC CGTGGTGCAG
GACGTGCTGG GCGGCACCGC GTCGGGGGTA GCCGCGCCGG CGTTGCCCGG CATGGACGCG
TTCGAGGTCG CGTCTGCGGA CGTCTGGGCG ACCGGCCTGT CACCGGATCG CTACCCGACC
GAGTTCGTGC GCCCCGGTCT CGACGCCGCG GGCGTGCGGC CGGTGGCGAC GCTGGGCGGG
ATCGAGAACG GTGCCCGGGT CGAGGTCGGC GGCGTCGTCA CGCACCGGCA GCGCCCCGGG
ACGGCGGGCG GGGTCACGTT CCTGTCGCTC GAGGACGAGA CCGGCCTGCT CAACGTCATC
TGCTCGCCGG GTCTGTGGGC GCGCTACCGA CAGACCGCGC TGCGCAGCCC CGCGCTCGTC
GTGCGCGGAA CGGTGGAGCG GGCCGACGGC GTCGTCAACC TCATGGCCGA CGGCATGCGG
TCGCTCGAGC TCAGGATCCC GACGCAGTCG CGCGACTTCC ACTGA
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| Protein sequence | MSTTDGARYA ELHAHSAFSF LDGASQPEAL VAEAARLELD AVAITDHDGL YGVVRFAEAA
RALGMRSVFG AELSLDQRTP ATGVPDPDAT HLVVLARGPA GYHRLSRAIA TAHLATGKKG
ERDYGHAVGL DPLEVLAEQA AGDWLVLTGC RKGAVRRALD GGADGADGAG GAGGAGSIAG
AEHGERAAAR ELDRLVALFG RDNVAVELTD LGAPADSARC DTLADLAARA GLPVVATGGV
HCAHPREGRL VDVLAAVRAR RSLEEIDGWL PPAPAHLRSA DEMLARHARH PQAVRTAAEL
GLECAFDLTL VAPRLPPHPV PPGYDEASWL RELTMRCART RYGTRDERPD AYAIIDRELD
IIVRLGFPGY FLIVHEIVDF CVQQGILCQG RGSAANSAVC YALGITAVDA VQHKLLFERF
LSDGRSGPPD IDVDIESGRR EEVIQFVYTR YGREHAAQVA NVISYRPRSA VRDAARAFGY
DVGQQDAWSK GIERWGTLRG PDPGNPDPAV KANATSTSST SSSPSRATGT AAGPKIREKG
VDTHDPAPPR HAPASAREMG EIPNHVLDVA EQMLRLPRHL GIHSGGMVLC HRPVIEVCPV
EWATMPGRTV LQWDKDDCAD AGLVKFDLLG LGMLTALRLA FEQVEATSGE RLALHSLPQE
DPKVYELLCA ADTVGVFQVE SRAQISTLPR LKPRNFYDIV VEVALIRPGP IQGNSVHPFI
RRRNGKEKVT YLHPLLEGAL SKTLGIPLFQ EQLMQIAIDV AGFSGSEADQ LRRAMGSKRS
LEKMEALHER LLAGMADRGV PRDVGEQIYD KLKAFSDFGF PESHAFSFAY LVYASAWLKI
HHPEAFFAGL LGAQPMGFYS PASLVADARR HGVVVRRASI ADSAVHALVE HGAADHGAVG
LVPRATQSSE TWLVDAGKAD ARGAAAVDPA LPLDPAADAE DADGGPSGRR FAVRLGLAPI
RGIGEKTAER IVTERDRAPF ADAQDLARRV RLTAAQLEAL ATAGALRCFG TSRREALWSA
GALAGESGRV HLTSQGTVVQ DVLGGTASGV AAPALPGMDA FEVASADVWA TGLSPDRYPT
EFVRPGLDAA GVRPVATLGG IENGARVEVG GVVTHRQRPG TAGGVTFLSL EDETGLLNVI
CSPGLWARYR QTALRSPALV VRGTVERADG VVNLMADGMR SLELRIPTQS RDFH
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