Gene Bcav_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2275 
Symbol 
ID7861887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2557148 
End bp2558176 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content74% 
IMG OID643866368 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002882288 
Protein GI229820762 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.995394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC CGACGATCGG CGACGTCGCT CGTGTGGCCG GGGTGACGAA GGCGACCGTG 
TCGCACGCCT ACAGCGGCAA GCGCCCGATC TCCGCCGCGA CCAAGGCGCG CGTCTTCGCG
GCCGCCCAGG AGCTGCAGTG GGTGCCGAGC TCCAGCGCAC GCGCTCTCGC GACGCGGCGG
GCGAACGCCA TCGGCATCGT GCTGGCGCGC GAGCCCGCGA TCCTCGCGTC CGACACGTTC
TTCCCGGCGT TCATCTCCGG CGTCGAGACC GCCCTGGCGG AGCACGAGGT CGCGCTCGTC
CTGCAGGTCG TCGGGTCCCG CACCGCCGAG GAGCGCGCCT ATCGCGCGAT GGCGAACGGG
CGAGCCGACG GCGTCATCGT GCTCGACCTG CACCGCACGG AGTGGCGGGT GCCGTTCCTG
CAGCAGCTGC GCCTGCCGGC GGTGCTCCTC GGCGCGTTCG ACGGACCCAC CTCGTTCTCA
TGCGTTCGCA CCGACGACGC CGCCCCCGTG CGCGAGCTCG TCGCGCACCT GCGCGGACTC
GGTCACGAGC GCATCGCCCA CGTCGCCGGG CCGCTGGACT ACGTGCACTC GCACGCCCGC
GCGCAGGCCT ACCTCGAGGA GGTGGGCACG CCCGAGCTCC TCCGGGAGGG GGACTTCGGC
GCCGGCAGCG GCCGCGCCCT CACGGCCGAG CTGCTCGAGC TGGCCGACCG TCCGACGGCC
ATCCTCTACG CCAACGACAC CATGGCCATC GCCGGATACT CGCTCGCGCG CAGCCGCGGA
CTCACCGTCC CGGACGACCT CGCCGTCGCC GGTTTCGACG ACGACCACCT CTCCGCCTAC
CTGACGCCGG CCCTCACGAG CGTGTCGTCC GACCCGCTCC AGCGAGGGCG CGTCGCGGCC
GAGCGCCTCC TCGCGGACCT CGCGGGGGAG CCGCCGCGCC AGGTCACCGT CGACTGCACA
GTCCTGCGCC TTCGCGCGAG CACCGAGGCC CGCGCCGCAC GTGGCCACCA ACCCGAGGAG
ACCTCATGA
 
Protein sequence
MSRPTIGDVA RVAGVTKATV SHAYSGKRPI SAATKARVFA AAQELQWVPS SSARALATRR 
ANAIGIVLAR EPAILASDTF FPAFISGVET ALAEHEVALV LQVVGSRTAE ERAYRAMANG
RADGVIVLDL HRTEWRVPFL QQLRLPAVLL GAFDGPTSFS CVRTDDAAPV RELVAHLRGL
GHERIAHVAG PLDYVHSHAR AQAYLEEVGT PELLREGDFG AGSGRALTAE LLELADRPTA
ILYANDTMAI AGYSLARSRG LTVPDDLAVA GFDDDHLSAY LTPALTSVSS DPLQRGRVAA
ERLLADLAGE PPRQVTVDCT VLRLRASTEA RAARGHQPEE TS